Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0804 atgacGCTTCTTTCCTCTCTCTGTTCCTCTCCTCCAATTCCTCCCTCATCGTTTCCATTGACATCTAATTTCTATGCTTTCTCCAACAACCTCAGGACCCAAATCCAATCCTCTGCTTCCACCAACATTTGCACCCAAAAAATCGACACCACTCTCTTAACCATCGCCGAATCCTTCTACGAGGATGAGCTCTGGGCCGCTGCCTGTCTCCGCGTCCGTTCCTTCCACCAATTCCGCCCCGATGCCTTCGGAGTCCAAGATCATACGAGGTACTTGGCTGAGCGCGAGTTCGAAGCACTTAAGGAGCGTGTTTCGGGGAAAAGAACGGGCTTCAGAAGAGTCTCTTGCATAAATGCCTCCCTTCCATTGTCCCATATTGCCACTCTCTCTGATGATTTATGCTCTTCATGTAAGTTTTCTGTCAATGGGGAGGATCGGATCGTAGTTGGCACTCTTGATCTTAGTCAGTGCTTGAGCCTTCCTGATGAAATTGTAGGGGTGAAGCCCGAGGTCATTGGAGCTGATATCACAAGGGCATACCTCAGTAATGTATGTGTTGCTAGAGAGTTGCACAgaaatgggttgggttatgcaCTTCTTGAAAAGTCAAAGTTAGTTGCTTATGATTGGGgCATAACAGATTTGTACGTCCATGTCGCTGTCGACAATGAACCAgcaaaaaatttgtatataaagaGTGGGTTTGTCTATGAAAGTGATGAACCTGCGTGGCAGGCCAGGTTTCTAGATCGACCCCGAAGACTTCTCCTATGGTCAGGGCTTTCAAGGACCTAA 795 0.4541 MTLLSSLCSSPPIPPSSFPLTSNFYAFSNNLRTQIQSSASTNICTQKIDTTLLTIAESFYEDELWAAACLRVRSFHQFRPDAFGVQDHTRYLAEREFEALKERVSGKRTGFRRVSCINASLPLSHIATLSDDLCSSCKFSVNGEDRIVVGTLDLSQCLSLPDEIVGVKPEVIGADITRAYLSNVCVARELHRNGLGYALLEKSKLVAYDWGITDLYVHVAVDNEPAKNLYIKSGFVYESDEPAWQARFLDRPRRLLLWSGLSRT 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0804 264 CDD NAT_SF 162 218 - -
Ssu6g0804 264 Gene3D - 125 251 - -
Ssu6g0804 264 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 87 254 IPR000182 GO:0016407
Ssu6g0804 264 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 148 245 IPR016181 -
Ssu6g0804 264 Pfam Acetyltransferase (GNAT) family 174 235 IPR000182 GO:0016407
Ssu6g0804 264 PANTHER OS08G0260000 PROTEIN 29 263 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu6g0804 Acetyltransf_1 5.7e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0804 - - gmx:100802268 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0804 6 12874557 12877212 Ssu6g0804 6 12874557 12877212 ECH