Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0788 ATGGCTGCATACAGAGAACCCATGAACATGAGCGAAAGAGCCCCCGTCTCGGCACAACAACCACACTCGCCATGGCATTCTCCGGTCCCGTACCTGTTCGGGGGCTTAGCGGCGATGTTGGGTCTCATAGCCTTCGCTCTGTTGATCCTCGCATGTTCCTATTGGAAGCTGTCCGGGTACCTCGAGGGGAACGGGGAATCAGAGCGGGACCTTGAAGCCGGCGAGGGAAAAACCGAGCAAGACCAGAAACCGCAGAGATCGTACGAGGAGAAGATCTTGGTGATCATGGCCGGGCAAGAGAAGCCAACATTCTTAGCCACGCCGAGCGTGTCTTCGAGTTGCAGCACCAGCAGGTCCTCTTCCTTCGGCGACAACACCAGCACCTGCACCTGCGAAGAGAACAGAAAATTGCTGGAAATCGCACAAGCCGCGAAAGAGGGGAGCGCCGCGACCACGGAAACGTCGCACACCTCGTCGGATCAGAACCCTTGA 492 0.5752 MAAYREPMNMSERAPVSAQQPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAGEGKTEQDQKPQRSYEEKILVIMAGQEKPTFLATPSVSSSCSTSRSSSFGDNTSTCTCEENRKLLEIAQAAKEGSAATTETSHTSSDQNP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0788 163 MobiDBLite consensus disorder prediction 142 163 - -
Ssu6g0788 163 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 8 157 IPR040359 GO:0080143
Ssu6g0788 163 PANTHER PROTEIN GLUTAMINE DUMPER 2 8 157 - -
Ssu6g0788 163 MobiDBLite consensus disorder prediction 147 163 - -
Ssu6g0788 163 MobiDBLite consensus disorder prediction 1 23 - -
Ssu6g0788 163 MobiDBLite consensus disorder prediction 107 128 - -
Ssu6g0788 163 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0788 Ssu-Chr6 12483407 12483898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0788 21 112 Glutamine Dumper (GDU) Family AT5G57685 70.213 2.47e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0788 - - gmx:100806224 249.21