Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu6g0757 | ATGAATTTCCATCCCAATACGTCTCTTCACCTAAGCCACCCAGATGATGGGAATCATCTCAATCTAGATCTTCTTCTTGAgccatcttcttcttcttcatcttcaccTTCACCTATTAGTCCCATTGAGCCCCGGATATTCTCATGCAACTATTGCCAGAGAAAGTTCTATAGCTCTCAAGCGCTAGGGGGTCACCAAAATGCTCACAAGCTTGAAAGGACACTGGCCAAGAAGAGCAGGGAACTGAGTTCAGCCATGCAATCTTATGGAGAACGGGAGCAGCGATCAAACTTCAGTGCTTCACGCCATATTGGTCGTGCTCTTGGGGTTGTGGATAACCAAGGACAAAGTTATGTGAGGCTTGGTGGAAGAAAAGAGTTTAGTTATGGTTCCAAGGAAGGGGTGGCTTCCTGGTCAAGGGCTTATAGTACTTCTGAACATGTTCAGGAGGATATTGGCCAACTTGACTTGTCGTTAAGGCTTTGA | 486 | 0.4342 | MNFHPNTSLHLSHPDDGNHLNLDLLLEPSSSSSSSPSPISPIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAMQSYGEREQRSNFSASRHIGRALGVVDNQGQSYVRLGGRKEFSYGSKEGVASWSRAYSTSEHVQEDIGQLDLSLRL | 161 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu6g0757 | 161 | MobiDBLite | consensus disorder prediction | 80 | 95 | - | - | |
Ssu6g0757 | 161 | PANTHER | BNAC02G44440D PROTEIN | 1 | 161 | - | - | |
Ssu6g0757 | 161 | SUPERFAMILY | beta-beta-alpha zinc fingers | 44 | 74 | IPR036236 | - | |
Ssu6g0757 | 161 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 49 | 69 | IPR013087 | - | |
Ssu6g0757 | 161 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 47 | 74 | IPR013087 | - | |
Ssu6g0757 | 161 | Coils | Coil | 68 | 88 | - | - | |
Ssu6g0757 | 161 | MobiDBLite | consensus disorder prediction | 74 | 98 | - | - | |
Ssu6g0757 | 161 | Gene3D | Classic Zinc Finger | 38 | 103 | - | - | |
Ssu6g0757 | 161 | PANTHER | ZINC FINGER PROTEIN JAGGED | 1 | 161 | IPR045320 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu6g0757 | Ssu-Chr6 | 12029393 | 12029878 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu6g0757 | 1 | 161 | C2H2 Transcription Factor Family | AT5G57520 | 48.503 | 1.73e-31 | 108 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ssu6g0757 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu6g0757 | - | - | gmx:100778014 | 237.269 |