Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0725 ATGGAAGGGCAAGTAGCTAAACGCAGACGTGTATACTCTGTGGAACCAAACCAACTAGTGCAATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCATTGGTGAAGATAAACGAGAAGAGTTCTATAGTAGATAGCAGCCATTGTGACATGAACAATGCTGTCAAGTATGAAGTGGACATGGCAATGGTGTTGTCAGCCCAAGGTTTTGCATGGAGTGAAGGCCTTAAAGTCAAGCTTCAAAGGGGTCATGTCAATGCAGCAAAAAGCACTAGCTTCCTTGAAAATGAAGCTGGTGAAGGTTCATCAAAGGTTTATGACAAAAATGAAGTTGTCCCAATGGAGTTCTCTTCAAACCCTAGCTCAAAGTCCCAGGTGGAGGTTTTGGGGAGCAAGTCTAAGTGCATGGAAATGTCAGAAGTGAAAAGGGATTTAGCCAGAGAAGATGACGAGGATGAGAACATCAACAACCAGTGGAAGAGGCTGAGAAGGTTGATACCTGGAGGAGAAGGGATGTGTGATGAACAAATGGCTGAAGAGCTTGAGAGTTACATTAGCTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTTCTGCTGCCAGAGACGCGTTAA 618 0.4337 MEGQVAKRRRVYSVEPNQLVQSIFTRNYLNHLVPALVKINEKSSIVDSSHCDMNNAVKYEVDMAMVLSAQGFAWSEGLKVKLQRGHVNAAKSTSFLENEAGEGSSKVYDKNEVVPMEFSSNPSSKSQVEVLGSKSKCMEMSEVKRDLAREDDEDENINNQWKRLRRLIPGGEGMCDEQMAEELESYISCLQMQVNALQFLLPETR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0725 205 PANTHER TRANSCRIPTION FACTOR BHLH146 2 203 - -
Ssu6g0725 205 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 203 IPR044660 GO:0006355
Ssu6g0725 205 Coils Coil 140 160 - -
Ssu6g0725 205 CDD bHLH_AtIBH1_like 149 201 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0725 Ssu-Chr6 11414775 11415392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0725 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.602 9.11e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0725 - - gmx:100775329 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0725 6 11414775 11415392 Ssu1g1459 1 33690292 33690900 PCT