Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0722 ATGGAAGCTCCTAACTTTGTCTTCTTGTCCTTGCTTCTTCTCCTGACTAGTGCTACTATAAGCTCAGCTCAACTCACTCGTGGCTTCTACAACAACATATGCCCCAATGTGGAGCAGTTGGTACGCTCTGCCGTTACACAGAAGTTCCAACAGACCTTTGTGACTGCTCCTGCCACTCTTCGACTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCGATTTTGCTTGCATCTCCAAATGGTAAGGCAGAGAAGGATCATCCTGATGACATTTCTCTAGCTGGGGATGGCTTTGACACTGTGGTTAAAGCCAAGGTAGCTGTTGATAGAGACCCTCAGTGCCGAAACAAAGTCTCTTGTGCTGATATACTCGCTCTGGCTACTAGGGATGTCATCAATTTGGCAGGGGGACCTTTTTATAACGTTGAATTGGGAAGGCGTGACGGGAGAATATCCACTATTGCCAGTGTTCAACGCCGTCTTCCTCACCCTGATTTCAATTTGGATCAGCTCAATTCCATGTTCAACTCTAATGGCCTATCCCAGACAGATATGATTGCATTATCAGGTGCACATACAATTGGGTTCTCTCACTGCAACCGCTTCTCAAAACGAATCTACAACTTCAGCCCCAGAAGCAGAATTGACCCAACACTAAATTTACAATATGCTTTTCAGCTTAGACAGATGTGCCCCTTAAGAGTTGATCCCAGAATTGCCATAAACATGGACCCCGTCACGCCTCAAAAGTTTGACAACCAATACTTCAAGAATCTGCAGCAAGGAATGGGTCTCTTCACTTCTGATCAGGTGCTGTTTACAGATGCAAGGTCAAAGGCCACAGTCAACTTATTTGCATCAAATGAAGGAGCTTTTCAGAAAGCTTTTGTTGATGCTATTACCAAGTTGGGAAGGGTTGGTGTTAAAACTGGAAAACAAGGTGAAATTAGGTTTGATTGCACCAGGCCCAACTAG 981 0.4485 MEAPNFVFLSLLLLLTSATISSAQLTRGFYNNICPNVEQLVRSAVTQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPNGKAEKDHPDDISLAGDGFDTVVKAKVAVDRDPQCRNKVSCADILALATRDVINLAGGPFYNVELGRRDGRISTIASVQRRLPHPDFNLDQLNSMFNSNGLSQTDMIALSGAHTIGFSHCNRFSKRIYNFSPRSRIDPTLNLQYAFQLRQMCPLRVDPRIAINMDPVTPQKFDNQYFKNLQQGMGLFTSDQVLFTDARSKATVNLFASNEGAFQKAFVDAITKLGRVGVKTGKQGEIRFDCTRPN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0722 326 Pfam Peroxidase 41 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PANTHER - 1 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 Gene3D - 28 326 - -
Ssu6g0722 326 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PANTHER PEROXIDASE 16-RELATED 1 326 - -
Ssu6g0722 326 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Ssu6g0722 326 Gene3D Peroxidase, domain 2 164 305 - -
Ssu6g0722 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Ssu6g0722 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Ssu6g0722 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0722 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0722 Ssu-Chr6 11367184 11369049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0722 5 326 Peroxidase AT2G18980 74.534 3.57e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0722 K00430 - gmx:100804620 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2562 2 84782018 84784273 Ssu6g0722 6 11367184 11369049 PCT
Ssu6g0722 6 11367184 11369049 Ssu1g1463 1 33786907 33789169 PCT