Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0592 ATGCCTTCCATTTCCACAATTCTCGCGCCACAATTCCAGAGTTCGTTCTTCCGCGCCTGTCCCACCCGCCACAAATGCCCCCCGCGAATCGCGGCTTCTTGGACCATGACTATGGACTCTGATTTTttgaacaagaagaagaagaagaagaagaaagaagtgtcGGTGCAACTCTCAAGCTTAACGCCACCTTTCTCCAGAGTGGAAACTGTGAGGTTCTGCGATCTCCATTTTGACGGCTTGCAACCTTCGGATCAAGAATTGGATCCACACGATAGATTTGAGTTTGGCAATTTTGTTGCACGACCAGCCCTGCTTGACCAAGAGTACTGGATAGCAGCATGGCTAAGAGCAGAAAGTGAGTGGGAAAATCGAACACCTACACGATATAGTGATCAATGTAAAAGGAAATTTGCTGATCAGGAATTTCATGCGATAAAAAAGCGGTGCAAGGAGCAAAATGGCGACAGTAGCACATGCATAATCACGGTGAGGAAGGAGCGGAAGAATGTAAAACGTACAATAGTAAAAAGTGTTGTAGGAACCCTTGATTTGAATATCCGATATCTGCGGCTAGGAGAGACCTTTCCTGGGGAACTGGTGGAGGCTCCTCGTTTTTGCAACATCAACAGATCACCATCAGGCAGATACGGTTATATTgcaaacttggttgttgccaaatCATTTCGTCGCAAGGGTATTGCAAGCAACATGTTGTACTTTGCTGTCAAATCTGCAAAATCTATTGGTGTGGCAAGTGTATATGCGCATGTGGACAGAAACAATAAACCAGCCCTGATATTGTACCAAAACTTGGGGTTTGGGGTAGTTGAAATGGCAAACCCCCTGTTGTTAGAAAATCAGACATACTTGCTTCGCTTACAGATGTAG 891 0.4265 MPSISTILAPQFQSSFFRACPTRHKCPPRIAASWTMTMDSDFLNKKKKKKKKEVSVQLSSLTPPFSRVETVRFCDLHFDGLQPSDQELDPHDRFEFGNFVARPALLDQEYWIAAWLRAESEWENRTPTRYSDQCKRKFADQEFHAIKKRCKEQNGDSSTCIITVRKERKNVKRTIVKSVVGTLDLNIRYLRLGETFPGELVEAPRFCNINRSPSGRYGYIANLVVAKSFRRKGIASNMLYFAVKSAKSIGVASVYAHVDRNNKPALILYQNLGFGVVEMANPLLLENQTYLLRLQM 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0592 296 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 296 - -
Ssu6g0592 296 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 296 - -
Ssu6g0592 296 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 174 278 IPR016181 -
Ssu6g0592 296 CDD NAT_SF 213 257 - -
Ssu6g0592 296 Pfam Acetyltransferase (GNAT) family 164 274 IPR000182 GO:0016407
Ssu6g0592 296 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 212 296 IPR000182 GO:0016407
Ssu6g0592 296 Gene3D - 114 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0592 Ssu-Chr6 9240229 9242053 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu6g0592 Acetyltransf_1 1.6e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0592 - - adu:107457848 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0592 6 9240229 9242053 Ssu6g0592 6 9240229 9242053 ECH
Ssu6g0592 6 9240229 9242053 Ssu1g1594 1 37792548 37794382 PCT