Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0583 ATGCTATCCGCGAAGAAGACTTACATAGTACACATGAAACACCGCCACGATTCCTCCGTGCACCCCACGCACCGTGACTGGTACGCTGCCACACTCGATTCTTCTTCAGACTCTCTCCTTTATGCATACACCGCTGCTTACAACGGCTTCGCTGCCACCCTGGACCCTCAACAAGCCCACGCGCTGCGCACTTCTGATTCTGTCTTGGGCGTCTACGAAGACACGCTCTACACGCTCCACACCACTCGCACCCCCGAGTTCCTGGGCCTCCAGGCCCATTCCGCGTTCTGGGAAGATCTCCACCATGCCTCACACGACGTCGTCATAGGGGTCCTCGACACAGGCATCTGGCCCGAATCGCAAAGCTTCGACGATTCCCAAATGCCCCAAATCCCCACGCGCTGGCGCGGTAACTGCGACTCCGCACCTGATTTCGACCCTTCCCTCTGCAACAACAAACTCATCGGCGCTCGCAGCTTCTCCAAGGGCTACCGCATGGCCTCCAATAACGCAAGAAAAACCAGAGACCCTGCCTCGCCGCGTGACCTCGACGGCCACGGAACCCACACCGCCTCCACCGCCGCCGGCTCCGCCGTCGCCAACGCCACGCTCCTCGGCTACGCCACCGGCACCGCGCGCGGCATGGCACCGCAGGCGCGCGTGGCGGCCTACAAGGTCTGCTGGACCGACGGCTGCTTCGCCTCCGACATTCTGGCCGGAATGGACCAGGCGATCCAGGACGGCGTCGACGTCCTCTCGCTCTCCCTCGGCGGCTCCTCCGCCGTCCCGTACTACTTCGACACCGTCGCAATCGGAGCCTTCGCGGCGGTGGACAGAGGCATCCTCGTCGTGTGCTCGGCGGGGAACAGCGGACCTCGCAGCGGTTCCGTCGCGAATGTCGCTCCGTGGATCATGACCGTCGGCGCCGGCACGCTGGACCGGGATTTTCCGGCGTACGCGACACTCGGGAACGGGAAACGCTTCGCCGGCGTTTCGCTTTACAGCGGAGAGGGGATGGGAGACGAACCGGTAGGTTTAGTTTATTTCAACGACCGGTCGAACTCGTCGAGCAGCATTTGCATGCCCGGTTCGCTGGACTCGGAGAGCGTGCGCGGGAAGGTGGTGATTTGTGACAGAGGGCTTAACACGCGCGTGGAGAAGGGCGCGGTGGTGCGCGACGCGGGCGGTGTGGGGATGATACTCGCGAACACGGCGGTGAGCGGCGAGGGACTCGTGGCGGACAGTCACCTGGTGGCGGCCGTAGCGGTGGGGGAAAGCGCCGGTGATGAGATCAGAGAGTACGCGTCGTTGGATCCTAATCCAACCGCTGTTCTTAGCTTCGGTGGGACCGTGTTGAACGTGAGGCCCTCGCCTGTGGTTGCAGCGTTCAGCTCTCGCGGGCCCAATGGTGTGACGGCCCAGGTCTTAAAACCGGATGTCATTGGGCCTGGGGTTAACATCTTAGCGGGATGGTCTGGTGCTGTTGGCCCATCTGGCTCTCAAGACAGTCGCAAAACGCACTTCAACATAATGTCTGGCACGTCCATGTCTTGTCCGCATATAAGTGGGTTGGCTGCGTTGTTGAAAGCGGCGCATCCAGATTGGAGTCCAAGTGCGATCAAATCTGCACTCATGACAACGGCCTATACCCATGACAACACGGAGTCTCCGCTTCGTGATGCAACGGGAGAAGAAGCCCTCTCCACACCGTGGGCCTACGGGGCCGGTCATGTAAACCCACAGAAGGCCCTCTCTCCTGGGCTTGTTTACGATGCCTCCACACAGGACTACATTGCGTTTTTGTGCTCCTTGAACTACACCCTCGACCATCTGAAGCTCGTTGTCAAGCATCCTGATGCGAATTGTTCTGTAAAATTTGCTGACCCGGGTGACCTCAATTATCCATCCTTCTCGGTTGTTTTCGGAAGCAATAAGGTTGTTCGATACACGCGCACGTTGACCAACGTGGGGGAGCAGGGATCTGTGTATGACGTGGCAGTGAGCGCGCCGTCCATGGTGGGAATAACGGTGAATCCTAATAGGCTTGCGTTTGGAGAAGTAGGGGAAAGGCACACGTACACAGTGACCTTTGTGTCCAATAGGGGTGTTAATGATTCGGTTACGTCTGAATTTGGTAGCATTATGTGGAGCTATGAACAACACCAAGTTAGGAGCCCGGTTGCTTTTACATGGACATTTTTTTGA 2205 0.5887 MLSAKKTYIVHMKHRHDSSVHPTHRDWYAATLDSSSDSLLYAYTAAYNGFAATLDPQQAHALRTSDSVLGVYEDTLYTLHTTRTPEFLGLQAHSAFWEDLHHASHDVVIGVLDTGIWPESQSFDDSQMPQIPTRWRGNCDSAPDFDPSLCNNKLIGARSFSKGYRMASNNARKTRDPASPRDLDGHGTHTASTAAGSAVANATLLGYATGTARGMAPQARVAAYKVCWTDGCFASDILAGMDQAIQDGVDVLSLSLGGSSAVPYYFDTVAIGAFAAVDRGILVVCSAGNSGPRSGSVANVAPWIMTVGAGTLDRDFPAYATLGNGKRFAGVSLYSGEGMGDEPVGLVYFNDRSNSSSSICMPGSLDSESVRGKVVICDRGLNTRVEKGAVVRDAGGVGMILANTAVSGEGLVADSHLVAAVAVGESAGDEIREYASLDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTAQVLKPDVIGPGVNILAGWSGAVGPSGSQDSRKTHFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTHDNTESPLRDATGEEALSTPWAYGAGHVNPQKALSPGLVYDASTQDYIAFLCSLNYTLDHLKLVVKHPDANCSVKFADPGDLNYPSFSVVFGSNKVVRYTRTLTNVGEQGSVYDVAVSAPSMVGITVNPNRLAFGEVGERHTYTVTFVSNRGVNDSVTSEFGSIMWSYEQHQVRSPVAFTWTFF 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0583 734 Pfam Fibronectin type-III domain 631 728 IPR041469 -
Ssu6g0583 734 CDD Peptidases_S8_3 77 549 IPR034197 -
Ssu6g0583 734 PRINTS Subtilisin serine protease family (S8) signature 104 123 IPR015500 -
Ssu6g0583 734 PRINTS Subtilisin serine protease family (S8) signature 512 528 IPR015500 -
Ssu6g0583 734 PRINTS Subtilisin serine protease family (S8) signature 182 195 IPR015500 -
Ssu6g0583 734 Pfam Subtilase family 105 553 IPR000209 GO:0006508|GO:0008236
Ssu6g0583 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 513 523 IPR023828 -
Ssu6g0583 734 CDD PA_subtilisin_like 319 443 - -
Ssu6g0583 734 SUPERFAMILY Subtilisin-like 79 588 IPR036852 GO:0004252|GO:0006508
Ssu6g0583 734 MobiDBLite consensus disorder prediction 166 191 - -
Ssu6g0583 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 80 IPR037045 -
Ssu6g0583 734 ProSiteProfiles Serine proteases, subtilase domain profile. 76 584 - -
Ssu6g0583 734 Gene3D Peptidase S8/S53 domain 106 597 IPR036852 GO:0004252|GO:0006508
Ssu6g0583 734 Gene3D - 313 452 - -
Ssu6g0583 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 731 IPR045051 -
Ssu6g0583 734 SUPERFAMILY Protease propeptides/inhibitors 6 78 - -
Ssu6g0583 734 Gene3D - 601 731 - -
Ssu6g0583 734 Pfam Peptidase inhibitor I9 7 80 IPR010259 -
Ssu6g0583 734 PANTHER CUCUMISIN-RELATED 3 731 - -
Ssu6g0583 734 Pfam PA domain 360 431 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0583 Ssu-Chr6 9072516 9074720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0583 3 734 Subtilisin-like Serine Gene Family AT2G05920 66.667 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0583 - - gmx:100786523 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0583 6 9072516 9074720 Ssu6g0583 6 9072516 9074720 ECH
Ssu6g0583 6 9072516 9074720 Ssu1g1600 1 38025495 38027291 PCT