Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0581 ATGGCAATTTCAGGGTCAGAGAGTCAGAGTCCCTCAGTGAAAAGCGTGGCTCAGGTTGAGGTTGAGTGTGTGAAATGCGACTCGTGTGGGTTCACAGAGGAATGCACCCCTGCGTACATCTCGAGGGTGCGTCAGAGGTACCAGGGCCGGTGGCTGTGTGGGCTGTGCGTGGAGGCTGTGAAGCACGAGGTGGTGAGATCAGATAGTGTCATCACCACGGAAGAAGCGCTGGACCGCCACATCAGTTTCTGCAGAGAGTTCAGATCATCCACGGTTCTGAACAAAACAGAGCACCCCATCTTTGCCATGGGTCGCGTTCTCCGGAGGAGCCTGGATTCTCCCAGGCCTCTCCGATCCAACTCGAGTGTGGCGCTTCCATCCGTTGATGGGATTCCTGCCCCACACTTGCTTCGATCGGAGAGTTGCTTCCCTACAATCCCTGGTTAA 447 0.5593 MAISGSESQSPSVKSVAQVEVECVKCDSCGFTEECTPAYISRVRQRYQGRWLCGLCVEAVKHEVVRSDSVITTEEALDRHISFCREFRSSTVLNKTEHPIFAMGRVLRRSLDSPRPLRSNSSVALPSVDGIPAPHLLRSESCFPTIPG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0581 148 Pfam Protein of unknown function (DUF1677) 21 109 IPR012876 -
Ssu6g0581 148 PANTHER OS01G0745000 PROTEIN 1 146 IPR012876 -
Ssu6g0581 148 PANTHER DUF1677 FAMILY PROTEIN 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0581 Ssu-Chr6 9032210 9032656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0581 - - gmx:100797385 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0581 6 9032210 9032656 Ssu1g3574 1 90972059 90972490 ECH
Ssu6g0581 6 9032210 9032656 Ssu5g0505 5 10852248 10852826 ECH
Ssu6g0581 6 9032210 9032656 Ssu6g0581 6 9032210 9032656 ECH