Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0562 ATGGGTCTACTGATATCAATACAAGAGGAATATGCAAGATCTGTTCCTTTACTTTTTGCACTAAAAATGCCTTTTGGCAATTGCAAGGGAAAGGAAGACAATCAATTCGAGTTATGGCATGCTTGTGCTGGACCTTTGGTTTCTTTGCCTCCTGTTGGAAGTCTTGTGGTTTACTTCCCCCAAGGACATAGTGAGCAAGTTGCAGCTTCCATGCAAAAGGAGACTGACTTCATACCAAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCATTGCATGCTGATCCTGAAACTGACGAGGTCTATGCACAGATGACCCTTCAACCTGTAAACAAAGTATGTTAG 360 0.4222 MGLLISIQEEYARSVPLLFALKMPFGNCKGKEDNQFELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKVC 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0562 119 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 29 117 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ssu6g0562 119 PANTHER AUXIN RESPONSE FACTOR 19 29 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0562 Ssu-Chr6 8776604 8777359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0562 37 117 B3 DNA Binding Superfamily AT5G20730 93.827 2.47e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0562 - K14486 ghi:107962189 160.229