Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu6g0530 | ATGGGTTTCTACACTGAAGACCCTATCTCTGGCTTGACAATAGGTCAGGCCATATACGAGGTAGCTCTGATCGTTGCAGTTCTGAGATGGGTGTTGTGCTTGGTTTTCAGAGTGATCAATGATAGAAAGACGCGGTCTGATGAGACCCCACCCGAGCCTTGTTCCCAGATGACAAGGGACAAGGACGACACTCTCGTATTGACCACGTTCGGCGAGATTGTGGAGAGGCTGCCACAAACGGAGGACACGTGTGCTGTTTGCTTGAGCCAGCTGAATATGGAGGACGAGGTTAGGGAGCTGATGAACTGTTACCATGTGTTCCACAGGGAGTGCATAGACAGGTGGTTGGAGCATGAGCATGAGAACCACAGCCCCACCTGTCCACTCTGCAGGGCTCCTTTGCTGAGTTCTTCTTGTCACCACAGCTCTACCACATGCCTGCCTCCTCCTCAGCCTAGTTGGGCTGTGGAGAGACTTCTCTATCTTTTTGGGGATGATCTGCTTCCTTGTTAG | 513 | 0.5185 | MGFYTEDPISGLTIGQAIYEVALIVAVLRWVLCLVFRVINDRKTRSDETPPEPCSQMTRDKDDTLVLTTFGEIVERLPQTEDTCAVCLSQLNMEDEVRELMNCYHVFHRECIDRWLEHEHENHSPTCPLCRAPLLSSSCHHSSTTCLPPPQPSWAVERLLYLFGDDLLPC | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu6g0530 | 170 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 169 | - | - | |
Ssu6g0530 | 170 | Pfam | Ring finger domain | 82 | 131 | IPR001841 | - | |
Ssu6g0530 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 135 | IPR013083 | - | |
Ssu6g0530 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 84 | 131 | IPR001841 | - | |
Ssu6g0530 | 170 | SMART | ring_2 | 84 | 130 | IPR001841 | - | |
Ssu6g0530 | 170 | SUPERFAMILY | RING/U-box | 77 | 137 | - | - | |
Ssu6g0530 | 170 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 169 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu6g0530 | Ssu-Chr6 | 8190284 | 8190796 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu6g0530 | 1 | 169 | C3H Transcription Factor Family | AT3G43430 | 45.977 | 1.64e-43 | 140 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu6g0530 | K16281 | - | gmx:100306203 | 321.242 |