Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0524 ATGGCAACGGGCAACGCGTCTTCATGCCCAGCACCCATGAAGGCCACATCCAATGGGGCGTTCCAACATGAAAATCCCCTCGATTATGCACTTCCCTTGTTAATCCTCCAGATTTGTTTGGTCGTCGCTTTTACTAGATTTCTTGCATTCCTTTGCAGACCCCTCAGACAACCCAGAGTCATTGCTGAGATCATCGGAGGAATACTGCTAGGACCATCTGCAATTGGACGAAACGAGAAGTTTCTGAACGCTGTTTTCCCAAAGAAAAGCATAACGGTTCTTGACACACTAGCCAACATTGGCCTTTTGTTCTTCTTGTTTCTAGTGGGGCTTGAGCTTGACATGCGTGCCATCCGGCGTAGTGGTCATAAGGCCTTAGGCATTGCCCTTTGTGGGATCACTGTGCCTTTTGTTCTTGGCATTGGTACTTCTTTGGCTCTTCGAGCCACCGTATCCAAGGGCGCTGAGCCAGTTTCCTTCCTTGTCTTCATGGGTGTTGCTCTCTCAATCACTGCCTTTCCCGTCCTTGCTAGGATCCTGGCTGAGCTTAAACTTCTCACCACTGATGTTGGCCGTATAGCAATGTCAGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCCTTTCCGGCTCCAACTCGTCCCCCCTTGTTCCTCTTTGGGTCTTGCTCAGTGGTGCTGCTTTTGTTATCTTTGCTATCTTTGCCATTAGACCCTTGCTTGTAGCTATGGCTAACCGTTCCCCGGAGGGTGAGCCAGTGAAGGAGGTGTACATATGCATCACATTGACGCTGGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATTCATGCCCTCTTTGGGGCTTTTGTGGTTGGTACCATTATACCCAAAGAGGGTTCCTTTTCTGGGGTGTTGATTGAGAAGATTGAGGACCTGGTGTCTGGCCTTTTCCTGCCACTATATTTTGTGTCTAGTGGTTTGAAGACTGATGTGGCAACTATTAGGGGAGGGCTTTCTTGGGCAATGTTAGTGCTTGTTATATTAAATGCTTGCTTTGGGAAGATTGTTGGCACAATCGTTGTGTCATTACTATGCAAGGTGCCTTCTAGAGAAGCCCTGGCACTTGGATTTCTCATGAACACAAAGGGTTTGGTAGAGCTCATCGTTCTCAACATCGGGAAGGACCGCaagGTGTTGAATGACCAAGCATTTGCCATTTGTGTTCTCATGGCATTGTTTACCACCTTCATCACCACCCCAATAGTGATGGCTGTATATAAACCAGCTCGCAGAGGAGCACCTTACAAGCACAGAACAATTCAGCGCAGAGATCCTGACACTGAGCTCCGATTGCTAGCTTGCTTCCACACCTCCCGCAACATTCCCACATTGATCAATCTCGTAGAGTCTTCCCGTGGAACCCGAAAGAGAGGAAAGCTTTGCATATATGCAATGCACTTGATGGAACTCTCAGAGCGATCTTCAGCAATCACAATGGTCCACAAGGCACGCAAGAATGGCATGCCCTTTTGGAACAAGAAGCAGGATGACAAAGATCACATGATCATTGCTTTTCAGGCTTATGAGAAACTGAGCAGTGTCAATATTCGCCCCATGACAGCCATCTCTGCTCTCAATAGCATCCATGAGGATATTTGTACTAGTGCTCACCAAAAGCGTGCAGCCATGATTATCCTTCCATTCCACAAACACCAGCGTGTGGATGGATCAATGGAGTCACTAGGACATTCATTCCATTTGATGAATCAGCTTGTGCTAAGCCATGCTCCTTGCTCAGTGGGAATTTTGGTTGATCGGGGTCTTGGAGGGACAAGTCAAGTCCAAGCTAGTGATGTTTCTTATAAGGTTGTTGTAGCCTTCTTTGGAGGACGTGATGATCGCGAAGCACTTTGTTATGGTATGAGAATGGCTGAGCACCCGGGGATTTTGCTCAATGTGGTTAAGTTTGTGCCTGCACCTGGGACATCATTGGCCTTTGGTGCTAAATTGGTTGGGGTGTCATCAAACAAGGACAAGAAAGCAATGGATGTGGCTGATGGCAGTAATTACGATGATAGAAAACAGGATGATCAATTGTGGAGTGAGTTTTTGAGTGCATGCAGCAACAGCCAAGAGTCAATGAAGCATGAGCAAAAGCTGGTGGAAACCAAAGGTGATATTGAGACAGCATTGAAGGAAATGAATAGGAGCAGTCTAATATTGGTTGGTAGAATGCCATCAGTAGCACCTTTGGTTAGCAAAAGTGATTGTCCAGAGCTTGGACCTGTTGGAAGCTATATGGCTTCTTCAGATTTCTCCACTGTTACATCAGTTATGGTAATTCAGCAATATAATCCCTCAACTGACATTCATCCGCTAGTGATGGAAGAATCTGATTTCCCAGATATGTCAGACACACCAAGGAGTTAA 2436 0.4639 MATGNASSCPAPMKATSNGAFQHENPLDYALPLLILQICLVVAFTRFLAFLCRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPKKSITVLDTLANIGLLFFLFLVGLELDMRAIRRSGHKALGIALCGITVPFVLGIGTSLALRATVSKGAEPVSFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSNSSPLVPLWVLLSGAAFVIFAIFAIRPLLVAMANRSPEGEPVKEVYICITLTLVLACSFVTDTIGIHALFGAFVVGTIIPKEGSFSGVLIEKIEDLVSGLFLPLYFVSSGLKTDVATIRGGLSWAMLVLVILNACFGKIVGTIVVSLLCKVPSREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHRTIQRRDPDTELRLLACFHTSRNIPTLINLVESSRGTRKRGKLCIYAMHLMELSERSSAITMVHKARKNGMPFWNKKQDDKDHMIIAFQAYEKLSSVNIRPMTAISALNSIHEDICTSAHQKRAAMIILPFHKHQRVDGSMESLGHSFHLMNQLVLSHAPCSVGILVDRGLGGTSQVQASDVSYKVVVAFFGGRDDREALCYGMRMAEHPGILLNVVKFVPAPGTSLAFGAKLVGVSSNKDKKAMDVADGSNYDDRKQDDQLWSEFLSACSNSQESMKHEQKLVETKGDIETALKEMNRSSLILVGRMPSVAPLVSKSDCPELGPVGSYMASSDFSTVTSVMVIQQYNPSTDIHPLVMEESDFPDMSDTPRS 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0524 811 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu6g0524 811 Gene3D - 33 435 IPR038770 -
Ssu6g0524 811 PANTHER CATION/H+ EXCHANGER 3 6 809 - -
Ssu6g0524 811 PANTHER CATION/H + ANTIPORTER 6 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0524 Ssu-Chr6 8108806 8111750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0524 1 807 Antiporter Super Family AT3G17630 68.350 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0524 - - gmx:100780382 1446.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0524 6 8108806 8111750 Ssu6g0524 6 8108806 8111750 ECH