Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0496 atggtgattaTAAAGcttgagaagaagaagaagaacgagAGAGAAGGAATACGACTTGGGAAATACGAGTTAGGTAGGACTCTGGGTGAAGGCAATTTTGGCAAAGTTAAGTTCGCTAGGAACACTGATTCTGGCCAACCTTTTGCTGTTAAGATCATAGAGAAGAACAAGATCATCGATCTCAACATCACCAATCAGATAAAGAGGGAAATAGCCACCTTAAAGCTCCTCAGGCATCCCAACGTTGTTAGATTATATGAGGTCTTGGCtagcaaaacaaaaatttatatggTACTTGAGTACGTGAATGGAGGGGAGTTATTTGACAAAATTGCATCCAGAGGTAAACTTACAGAAGGGGAAAGTAGAAAGCTGTTCCAACAGTTGATTGACGGGGTGAGCTACTGCCACACTAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTGCTAGTGGACAACAAAGGGAACATAAAAATAACTGATTTTGGCCTTAGTGCTTTACCCCAGCATCTTAGGGCAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGATTCTTGCTAATAAGGGCTATGACGGTGCAACATCAGATGCATGGTCATGTGGTGTTATATTGTATGTAATCCTAACAGGATGCCTACCTTTTGATGATAGAAATCTTGTAGTTCTCTATCAGAAGATTTTTAAAGGAGATGTTCAGATACCAAAATGGCTATCACTGGGTGCACAAAACATGATAAAGAGGATTCTTGATCCCAACCCGGAAACACGGATAGCAATGGCTGGGATCAAAGAAGATCCATGGTTTAAGCATGGTTATATTCCAGCAAATCCTGAGGATGAGGATGTATATGTTGACATTGAAGTAATTTCCATCCATGAAGAGCCAAATGAAGCAGGACAGAGGAATTCAGGATCACCAACCCTTATCAATGCGTTTCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTCTCTGAGAGAAAGATAAGATTTACATCAAATCTTTCAGTTAAAGATTTGATCGAGAGGATTGAAAACTCTGTGACAGAAATGGAATTTAGAGTCCAGAAGAAAAATGGCAGTTTGAAAGTGATAGGAGAGAACAAGACGCACAAAACTCTTGGCCGCCTCTCAGTGGCTGTAGAGGTGTTTGAAATAAGCCCTTCATTGTATGTAGTAGAATTGAGGAAGTCTTATGGAGATAGTTCTGTATATAAACAGTTATGcaagaaattattgaatgatttgGGTGTTCCCCCTAAGCAAGCGCTAGTGAGCTCAGCAGCCAATTAG 1344 0.3899 MVIIKLEKKKKNEREGIRLGKYELGRTLGEGNFGKVKFARNTDSGQPFAVKIIEKNKIIDLNITNQIKREIATLKLLRHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIASRGKLTEGESRKLFQQLIDGVSYCHTKGVFHRDLKLENVLVDNKGNIKITDFGLSALPQHLRADGLLHTTCGSPNYVAPEILANKGYDGATSDAWSCGVILYVILTGCLPFDDRNLVVLYQKIFKGDVQIPKWLSLGAQNMIKRILDPNPETRIAMAGIKEDPWFKHGYIPANPEDEDVYVDIEVISIHEEPNEAGQRNSGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSVKDLIERIENSVTEMEFRVQKKNGSLKVIGENKTHKTLGRLSVAVEVFEISPSLYVVELRKSYGDSSVYKQLCKKLLNDLGVPPKQALVSSAAN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0496 447 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g0496 447 Gene3D Transferase(Phosphotransferase) domain 1 13 317 - -
Ssu6g0496 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Ssu6g0496 447 Pfam NAF domain 315 374 IPR004041 GO:0007165
Ssu6g0496 447 SUPERFAMILY Protein kinase-like (PK-like) 18 290 IPR011009 -
Ssu6g0496 447 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 443 - -
Ssu6g0496 447 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Ssu6g0496 447 Gene3D Kinase associated domain 1, KA1 318 435 - -
Ssu6g0496 447 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g0496 447 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Ssu6g0496 447 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g0496 447 CDD CIPK_C 319 430 - -
Ssu6g0496 447 PANTHER SERINE/THREONINE KINASE 14 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0496 Ssu-Chr6 7649281 7654587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0496 85 443 CBL-interacting serine-threonine protein kinases AT3G17510 69.146 3.82e-176 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ssu6g0496 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0496 K07198 - gmx:100777468 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0496 6 7649281 7654587 Ssu6g0496 6 7649281 7654587 ECH
Ssu6g0496 6 7649281 7654587 Ssu1g1686 1 41150268 41156434 PCT