Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0351 ATGGTTCTCTTTCCATCTTTTGTGAATGGATTGGCGAGAACTGTGTCaatcaagaaagagaagaaTTGTCAAAAGGAAGATGGAAGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAGGAAGAATGAAATGTTATTGAGTTCATCTGGAGTTGTTAAGTCCACCAGGGCCAACAATTTTGTTTCTGTGTTCACTAATAGGGGCCAGAAAGGAGTCAATCAGGATCGTCTTCTTGTTTGGGAGGAATTTGGTTGCCAACAAGACATAATGTTCTGCGGAGTTTTTGATGGGCATGGCCCATGGGGACACTTTGTAGCCAAAAGGGTCAGGAAACTAGTCCCAGCCTTTTTGCTCTGCAATTGGCAAGAAAATCTGGCTGCAACATCACTTGACCTGGATTTTAAGATTGAAGCAGACAAAAATATCCATGGATTGGACATATGGAAGCAATCATATATAAAGACTTTTGCTGCCGTTGATCAGGATCTGAAGCAGCACACTGGGATTGATTCCTTTCTAAGTGGCACCACAGCATTGACAATTATCAAACAGGGTGAATATCTTATAATAGCAAACATAGGTGATTCTAGGGCTGTTTTGGCAACCACTTCAGAGGATGGAAGATTAACTCCGCATCAGCTTACCACTGACTTCAAGCCAAATTTACCACAGGAGGCAGAACGCATAACACAATCTAGAGGGCGGGTATTTTGTTTGGAAGATGAACCAGGAGTGTACAGGGTCTGGATGCCAAACGGTAAAACGCCAGGACTAGCAATATCTAGAGCTTTTGGAGACCACTGCATGAAGGACTTTGGACTAATCTCTGTGCCAGATGTAACACACAGAAAAATTACCCCCAGGGATCAATTTGTCATCTTGGCAACAGATGGGGTATGGGATGTTATATCCAACCAGGAAGCAGTGAAGATTGTTTCTGCAACGCCACATAAAGAAAAGGCAGCTCAAAGGCTCGTGAAATGTGCCATACATGAATGGAAACGGAAGAAAAGTGGCATTGCTATGGATGATATGTCAGCTATTTGCCTCTTCTTTCGCTCTTCCCCTCATCAACTCCCAGTCATTAAAATTGTTGATTAA 1101 0.4233 MVLFPSFVNGLARTVSIKKEKNCQKEDGRKAVEELAKEARKNEMLLSSSGVVKSTRANNFVSVFTNRGQKGVNQDRLLVWEEFGCQQDIMFCGVFDGHGPWGHFVAKRVRKLVPAFLLCNWQENLAATSLDLDFKIEADKNIHGLDIWKQSYIKTFAAVDQDLKQHTGIDSFLSGTTALTIIKQGEYLIIANIGDSRAVLATTSEDGRLTPHQLTTDFKPNLPQEAERITQSRGRVFCLEDEPGVYRVWMPNGKTPGLAISRAFGDHCMKDFGLISVPDVTHRKITPRDQFVILATDGVWDVISNQEAVKIVSATPHKEKAAQRLVKCAIHEWKRKKSGIAMDDMSAICLFFRSSPHQLPVIKIVD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0351 366 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Ssu6g0351 366 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 358 - -
Ssu6g0351 366 CDD PP2Cc 59 352 IPR001932 -
Ssu6g0351 366 Pfam Protein phosphatase 2C 84 331 IPR001932 -
Ssu6g0351 366 SMART PP2C_4 52 350 IPR001932 -
Ssu6g0351 366 Gene3D - 45 354 IPR036457 -
Ssu6g0351 366 PANTHER ALPHABET, ISOFORM E-RELATED 1 358 - -
Ssu6g0351 366 SUPERFAMILY PP2C-like 57 353 IPR036457 -
Ssu6g0351 366 Coils Coil 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0351 Ssu-Chr6 5614913 5617150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0351 1 352 PP2C-type Phosphatase Gene Family AT3G05640 59.887 5.75e-161 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0351 - - gmx:100817397 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0351 6 5614913 5617150 Ssu6g0351 6 5614913 5617150 ECH