Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0330 ATGGGCGGCCAGATGCAGCAGAGCAATGCTGCCGCCACTGCTCTGTATGAGCACGCCGGCGCCGGATCCCTGCACAATGCGGCAGGGCCGGCCACCGATGCCGGCGACGCCGTCATGGCGCGGTGGTTGCAATCCGCTGGCTTGCAGCATCTGGCCTCTCCGTTGGCTTCCACTGGCATCGATCAACGCCTCCTCCCCAACCTTCTTATGCAGGGTTACGGAGCACAGTCTGCAGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTCAATTTTAACGGGGAATCTGGTTCTGAGCCATATACGCCCACTGCCCAAAATTTAGGTGGAGGGGCTGTATCAGATGGGTTTTATTCTCCAGACTTCAGGGGTGATTTTGGAGCTGGGCTTTTGGATCTTCATGCCATGGATGATACAGAGCTTTTGTCTGAGCATGTTATTTCAGAACCCTTTGAGCCATCACCCTTTATGCCTGGAGGCGCTAGAGTTTTTGAAGATGATTTCAATCCAATTAGCAGAAAGCAGGAAAGAGAAGCAGATGCTGATGCATCAGTTTTCTTACCtacaaatgaaaaagagaataataCAACTACAAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGGAAAAGGCCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTATATGACAATGCATATTTGGCAGTCCATGAACCCAAACTAAAGGTTGATCTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGACGCTGTTCTTGATGAGAATGTTACCAATGATGAAGTATATCGAGTCACAGTTGAACCAATTATTCCCACAATTTTTGAAAGAACCAAAGCTACATGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCATTGCCGCTCAGAGCTGCAGAAGACCTTGTTAGACAGTTGCATCAGCCAGTATATCGAAATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGTGACAGAAAGAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTGTGTATTGTTGGACTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTCATTGAAAAGGGAAATGCAGCAAGAAGTACAGGGTCAACTGGTGCAAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAACTTGTTGTAAAGAGGCACAATGAGGTAAAAGAGAGCAAGCGGAACAATAATGATGGAAATGACGCAAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGACCGTCAGACAagGATTGAAGGTGCTGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGCAAACTTACAGAAGTGCTCCGTGACTCCTTTGTTGGAAATTCCAAAACTGTTATGATCTCTTGTATATCCCCAAATGCTGGGTCTTGTGAACACACACTTAATACCTTGAGATATGCAGACCGAGTTAAAAGTTTATCCAAGAGTGGAAATCCTAGAAAGGACCAGGCCCCAGTACCACCAGCGAATAAAGAGGTTTCATCCACATCTTCACTTCCAGCTAGTGTTGGTGCAGAGGATTTTAATGGTCAACGTCAAGAGGTAAAGACAATGGACATGGGCAGGAAAGTTATCGAAAAGGAAAGTTCTTTGTACAGCTCTCCTGCTGATGTTGACAAACAACCATCGAGTTTTTCTTCTGGTTACCCATTCAATGGGCGAGAGGAAAAAAGCTTCATTTCTGCCCCAGTGGACAGGGAAAGGTTTGAAGTGAAGAATTCTTATGGTGATTCTACCAGTCAAAAGATGAACACTTATTCCCTAAATGATGCAGATGAGAAAGTGCAAAGGGTGTCTCCCCCACGCAGAAAAGGGACCAAGGAGGAGAAATCTGAAAGAGCTGTAAATTGGGCAAAAAGGGATGGCAATGGTTCTGATCATTTCACCACAAGCTCCAAGCAGCAGAGCACAGGAAATTATAACAGAGTTACCACTGGATCAGTTACCACTGCATCGGGGCAGTCTGAAACAGAATCCTCTTCTGATGTGAATATCAGCGCAATACTTGAGGAGGAAGAAGCACTACTTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTATTGGCAGAAGTGGACCAGCCAGGAAGTCTTATTGACAACTACGTAACTCAGTTGAGTTTTGTGCTTTCTCGTAAAGCAGCTAGTCTCGTCAGTCTCCAAGCTCGCCTGGCAAGATTCCAACATCGACTAAAAGAACAAGAGATATTGAGTAGAAAAAGAGTACCCCGTTAA 2463 0.4352 MGGQMQQSNAAATALYEHAGAGSLHNAAGPATDAGDAVMARWLQSAGLQHLASPLASTGIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTAQNLGGGAVSDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGARVFEDDFNPISRKQEREADADASVFLPTNEKENNTTTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVYDNAYLAVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEVKESKRNNNDGNDAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPVPPANKEVSSTSSLPASVGAEDFNGQRQEVKTMDMGRKVIEKESSLYSSPADVDKQPSSFSSGYPFNGREEKSFISAPVDRERFEVKNSYGDSTSQKMNTYSLNDADEKVQRVSPPRRKGTKEEKSERAVNWAKRDGNGSDHFTTSSKQQSTGNYNRVTTGSVTTASGQSETESSSDVNISAILEEEEALLAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0330 820 Coils Coil 793 813 - -
Ssu6g0330 820 MobiDBLite consensus disorder prediction 557 572 - -
Ssu6g0330 820 PANTHER KINESIN-RELATED PROTEIN 6 5 678 - -
Ssu6g0330 820 MobiDBLite consensus disorder prediction 580 594 - -
Ssu6g0330 820 Gene3D Kinesin motor domain 183 544 IPR036961 -
Ssu6g0330 820 PANTHER KINESIN-LIKE PROTEIN 675 819 - -
Ssu6g0330 820 PANTHER KINESIN-LIKE PROTEIN 5 678 - -
Ssu6g0330 820 MobiDBLite consensus disorder prediction 642 660 - -
Ssu6g0330 820 MobiDBLite consensus disorder prediction 663 688 - -
Ssu6g0330 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 541 IPR027417 -
Ssu6g0330 820 MobiDBLite consensus disorder prediction 602 619 - -
Ssu6g0330 820 PANTHER KINESIN-RELATED PROTEIN 6 675 819 - -
Ssu6g0330 820 Pfam Kinesin motor domain 212 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g0330 820 ProSiteProfiles Kinesin motor domain profile. 206 541 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g0330 820 SMART kinesin_4 204 547 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g0330 820 Coils Coil 737 768 - -
Ssu6g0330 820 ProSitePatterns Kinesin motor domain signature. 440 451 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu6g0330 820 PRINTS Kinesin heavy chain signature 397 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g0330 820 PRINTS Kinesin heavy chain signature 491 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g0330 820 PRINTS Kinesin heavy chain signature 441 459 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g0330 820 PRINTS Kinesin heavy chain signature 287 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g0330 820 MobiDBLite consensus disorder prediction 541 627 - -
Ssu6g0330 820 MobiDBLite consensus disorder prediction 641 730 - -
Ssu6g0330 820 CDD KISc_KIF2_like 206 539 - -
Ssu6g0330 820 MobiDBLite consensus disorder prediction 691 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0330 Ssu-Chr6 5236101 5244917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0330 199 541 Calmodulin-binding Proteins AT5G65930 33.521 1.50e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0330 K10393 - gmx:100778915 1479.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0330 6 5236101 5244917 Ssu6g0330 6 5236101 5244917 ECH