Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0198 ATGACCTTTTTCATGTTATATAATCAGTTGAGATGCACCACCCTTTCCACTAAACATTCATTGTTTCCAACAATGCAGGTAACAGACGTTATTCTGCTGGGCTTGGCCTTCGTCTTCCTCCGCTGGTGGTGGCGCTACTGGTCCACCACCGGCGGCGGGCCCAAGAACCTCCCTCCAGGCCCGCCCGGGTGGCCCATCGTGGGAAACCTCTTCCAGGTGATCCTGCAACGCCGCCACTTCATCTACGTGGTCCGCGACTTACGTAAAAAATACGGTCCAATCTTCACCATGCAAATGGGTCAGCGCACGTTGATCATCGTCACGAGCGCAGACCTGATCCACGAGGCGCTGATCCAGCGAGGCCCAGTGTTCGCGAGCCGGCCCAAAGACTCCCCCATCCGCCTCATCTTCAGCAAGGGAAAATGCGCCATCAACTCCGCCGAGTACGGCCCTCTCTGGCGCACCCTCAGGAAGAACTTCGTAACCGAGATGATCACCCCGCTGAGGATAAAACAGTGCGGGTGGATAAGAAAATGGGCCGTGGAGGCCCACATGAGGAGGATCCAGCAGGAGGCCCGCGAGCAAGGGTTCGTGGAAGTCATGAGCAACTGCAGGCTCACCATCTGCAGCATCCTCATCTGTCTCTGCTTCGGCGCGAAGATCGAGGAGAACCGAATCAAGAGCATAGAGAGCATTTTGAAGGACGTCATGCTCATCACGCTTCCGAAGCTTCCAGACTTTTTGCCGGTGTTAACGCCGTTGTTCCGGAGACAGGTGAAGCAGGCGAGGGAGCTGAGGAGGAGGCAGGTGGAGCTGTTGGCGCCGTTGATAAGAAGCAGGAAGGCTTACGTGGAGGGGAAGTTAGAGGGTGCTGACATGGCGAGTCCCGTGGGTGCTGCTTACGTGGACTCGTTGTTCGGGTTGGAGGTGCCGGAAAGAGGACGGTTGGGGGAGGAGGAGCTGGTGACGCTCGTGTCGGAGGTTATCAGCGCCGGGACGGACACGAGCGCCACGGCGGTGGAGTGGGCGCTGCTTCACTTGGTGATGGATCAGGAGATTCAGGAGAGGTTGTATAGGGAGATTGTGGAGTGTGTGGGGAAGGACGGGGCGGTTACGGAGAGTCACGTGGAGAAGATGCCTTATCTGAGCGCCGTCGTCAAGGAGACTTTCCGGCGACACCCGCCGAGCCACTTTGTGCTTTCGCACGCGGCCACCGAGGAGACGAAGCTTGGGGGCTATACCGTCCCGAAGGACTCGAGTGTGGAGTTTTACACGGCGTGGTTGACGGAGGATCCGAGTATGTGGGAGGATCCGAACGAGTTCCGACCCGAGAGGTTTTTGAGCGGGGATGGGGTGGACGTGGACGTGACTGGGACCAAAGGGGTGAGGATGATGCCGTTCGGTATAGGGAGGAGGATTTGTCCAGCGTGGACTCTGGGCATCTTGCACATAAACTTGTTGCTGGCTAAAATGGTGCATGCTTTCCACTGGTTGCCCAATCCCAATAACCCGCCCGACCCGGCTGAGACTTTCGCTTTCACTGTTGTCATGAAGAACCCTCTCAAGGCTGTTATTGTGCCACGATCTATTTAA 1593 0.5712 MTFFMLYNQLRCTTLSTKHSLFPTMQVTDVILLGLAFVFLRWWWRYWSTTGGGPKNLPPGPPGWPIVGNLFQVILQRRHFIYVVRDLRKKYGPIFTMQMGQRTLIIVTSADLIHEALIQRGPVFASRPKDSPIRLIFSKGKCAINSAEYGPLWRTLRKNFVTEMITPLRIKQCGWIRKWAVEAHMRRIQQEAREQGFVEVMSNCRLTICSILICLCFGAKIEENRIKSIESILKDVMLITLPKLPDFLPVLTPLFRRQVKQARELRRRQVELLAPLIRSRKAYVEGKLEGADMASPVGAAYVDSLFGLEVPERGRLGEEELVTLVSEVISAGTDTSATAVEWALLHLVMDQEIQERLYREIVECVGKDGAVTESHVEKMPYLSAVVKETFRRHPPSHFVLSHAATEETKLGGYTVPKDSSVEFYTAWLTEDPSMWEDPNEFRPERFLSGDGVDVDVTGTKGVRMMPFGIGRRICPAWTLGILHINLLLAKMVHAFHWLPNPNNPPDPAETFAFTVVMKNPLKAVIVPRSI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0198 530 SUPERFAMILY Cytochrome P450 58 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 Gene3D Cytochrome P450 53 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PANTHER CYTOCHROME P450 LIKE PROTEIN 27 527 - -
Ssu6g0198 530 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 27 527 - -
Ssu6g0198 530 Pfam Cytochrome P450 58 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g0198 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0198 Ssu-Chr6 3153779 3155371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0198 25 529 Cytochrome P450 AT1G11600 67.647 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0198 K21995 - gmx:100787281 929.858