Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0186 ATGAACTTCTACAAGGAAACATGCCCTCAGGCTGAAGACATCATCAGAGAACAAGTCAAGCTTCTCTACAAGCGTCACAAGAACACTGCTTTCTCCTGGCTCAGGAACATCTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCACTTTTGCTGGACTCCACAAGAAGGACCTTGTCTGAGAAGGAGACAGACAGAAGTTTTGGGTTGAGGAATTTCAGGTACATTGAGACCATCAAAGAAGCTGTGGAAAGGGAATGCCCAGGAATTGTTTCCTGTGCTGATATCCTCGTTCTCTCCGCCAGAGATGGCATTGTTTCGCTAGGAGGCCCCTATATCCCTCTTAAAACGGGAAGAAGGGATGGTAGAAGGAGCAGAGCTGATGTGGTTGAGCAGTTCCTCCCAGACCACAATGAGTCCATTTCTGCAGTTCTTGAGAAGTTTGGTGCCATGGGAATTGACACCCCCGGCGTGGTTGCATTGCTTGGAGCACACAGTGTTGGTCGTACCCACTGTGTGAAGTTGGTGCACCGTTTGTACCCAGAGGTTGATCCAGCGCTCAACCCTGACCATGTCCCTCACATGCTGAAGAAGTGCCCTGATGCCATTCCAGACCCCAAGGCCGTGCAGTACGTGAGAAACGACCGTGGCACCCCCATGATTCTAGACAACAACTATTACAGGAATATATTAGACAAGAAGGGCCTGTTGATAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAGTTTTCTAGAGCCATTACCTTGCTCTCTGAAAACAATCCTCTCACTGGCACAAAGGGTGAGATCAGAAAGCAGTGCAATGTTGCCAACAAGCACCATGAGGAGCCTTAA 906 0.4857 MNFYKETCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGIVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLEKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDKKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNVANKHHEEP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0186 301 Gene3D - 2 295 - -
Ssu6g0186 301 ProSiteProfiles Plant heme peroxidase family profile. 1 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 SUPERFAMILY Heme-dependent peroxidases 1 295 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 CDD secretory_peroxidase 1 293 IPR033905 GO:0004601|GO:0042744
Ssu6g0186 301 PANTHER PEROXIDASE 25-RELATED 1 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PANTHER PEROXIDASE 42 1 294 - -
Ssu6g0186 301 Gene3D Peroxidase, domain 2 135 274 - -
Ssu6g0186 301 PRINTS Plant peroxidase signature 71 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 8 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 32 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 156 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 109 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 213 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 229 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 269 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Plant peroxidase signature 90 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Haem peroxidase superfamily signature 157 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 PRINTS Haem peroxidase superfamily signature 30 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0186 301 Pfam Peroxidase 16 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0186 Ssu-Chr6 2931812 2934050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0186 1 298 Peroxidase AT4G21960 85.235 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0186 K00430 - gmx:547513 598.201