Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0157 ATGGAAATATCTTTTCCTTGGATTCTGCTTGCCACAGTGGTTATGGCAATGCCACTTTCATTTCGGATAAAAGCAAACCAACTTTCTTACGACTACTACAAGTTTTCATGCCCAAACTTGGAAAGCATAATCAAGAGTGAATTGCTAAGCTTATTCTTGACAGATGCTACTGCACCAGCTGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAAGGATGTGATGCCTCAATTTTGCTGGACTCCAACTACCTTACTCTCAGCTCTGAAATGATTTCTTCAAAGAACTTTGGCATCAGAAAGCGGGAAAAGATCAGCCACATAAAATCAATATTAGAAGGAGAATGTCCGGGGCAGGTGTCTTGTGCAGATATCATTGTATTAGCTGCTAAGGAATCAGTGTCATTCTCCGGAGGACCCCAGATTGAGATCCCACTTGGAAGAAAAGACTCCAGAACTTGTAGTTTCCAGGAGGCTGATGCTAAGCTTCCTTCGCCAACAATAGCGGTTGATGAATTTATATCCATTTTCATGTCTAAAGGAATGAGCATCGAAGAGTCTGTTTCCATTTTAGGTGCACATACACTAGGGGTTGGACACTGCTTGAACATTGTTGGTAGATTGTATGATCCACGTGTAGGGGACACGATGGATTTTGAGTTTGAAGCCTCACTTAGACTGGCATGCCCAACTGACATTCCTCTGACAAACCTCACATTTGTGCCTAATGACATGACCCCCGTTATATTTGACAACCAGTATTACCGAGACATTATAATGGGGAGGGGTTTGTTTGGTATTGACTCCAGCATTTCTATAGATCCGCGAACAGCACCGATTGTCATGCGGTTTGCTATGGATCGGAACTACTTCTTCAAGGCTTTCTCATCTGCATTTGTTAAGCTTTCTTCTACCAATGTTCTCACAGATGTGCAGGGTGATGTCCGAAGGCAATGCAACCAGGTAAACTAA 975 0.4287 MEISFPWILLATVVMAMPLSFRIKANQLSYDYYKFSCPNLESIIKSELLSLFLTDATAPAAFLRLMFHDCQVQGCDASILLDSNYLTLSSEMISSKNFGIRKREKISHIKSILEGECPGQVSCADIIVLAAKESVSFSGGPQIEIPLGRKDSRTCSFQEADAKLPSPTIAVDEFISIFMSKGMSIEESVSILGAHTLGVGHCLNIVGRLYDPRVGDTMDFEFEASLRLACPTDIPLTNLTFVPNDMTPVIFDNQYYRDIIMGRGLFGIDSSISIDPRTAPIVMRFAMDRNYFFKAFSSAFVKLSSTNVLTDVQGDVRRQCNQVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0157 324 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601|GO:0042744
Ssu6g0157 324 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 Gene3D Peroxidase, domain 2 165 303 - -
Ssu6g0157 324 PANTHER PEROXIDASE 21 322 - -
Ssu6g0157 324 Pfam Peroxidase 47 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 Gene3D - 31 324 - -
Ssu6g0157 324 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu6g0157 324 PANTHER PEROXIDASE 25-RELATED 21 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0157 Ssu-Chr6 2540167 2541388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0157 74 324 Peroxidase AT3G17070 53.125 1.43e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0157 K00430 - gmx:100806951 581.637