Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0151 ATGGCCAGAAGGAGTGTTGCTTCCATAGCTTTACCATCCCTAAGCATTTTCATTTCCATGTTCTTGGTTGCTATAACTTGCTTTCAAGAAGAGCGATCAATATATTTGGTCTTATTGGAAGGAGACGGGCTTGCATTTCATGAAGGTTCACGGGACGAAGATTCATCAATAGTTCACCCCAACAGTGAAGCCTCGAACGCACATGCAAAGCACTTATTGGCATCTCACGATCTACTTCTGCAAAGTACCTTGGAGACTGGAAGCTACAATAAACTCCACAGTTACAAACACATTATCAATGGCTTTTCCGTCCACACAACCCCTTCCCAGGCTGCGAGACTAAGAGGTAGGCCGGGAGTTAAGTTAGTAGAGAAGGACAGAGGAGCGAAAAAGATGACAACATACACGCCTGAGTTTCTAAGTTTACCAGAAGGAATATGGGCGCAAGAAGGAGGAGACAGAAACGCAGGTGATGGGGTTGTTATTGGTTTTGTGGATAGTGGCATCAACCCACTTCATCCCAGCTTTGCTTACGATCCCATGCACCCTTTCACATCAAATCTCTCTCGTTTTGAGGGTGCCTGTGAGACGGGACCTCTCTTCCCTCCTTGTTCTTGCAATGGAAAGATAGTAGCAGCGAGGTACTTCTCGGCTGGGGCTGAAGCTGCTGTTACCCTTAATGCTTCCAAGGATTTTCTTTCACCGTTTGATGCAGATGGACATGGCAGTCATGTGGCATCTGTTGCTGCTGGTAATGCTGGTGTTCCCGTTGTGGTGAACggttttttttatggaaaagcTAGCGGAATGGCACCACGTGCAAGGATTGCGGTTTATAAGGCTATCTATCCCTCCGTGGGAACTCTAGCAGATGTTATTGCTGCTATCGATCACGCTGTCCTGGATGGGGTGGATGTCCTAACACTCTCTGTTGGACCAAATGAACCACCAGAAGACACGTTGACCTTCTTGAGCATGTTTgatatttctttgttatttgcACGAAAAGCAGGAGTTTTTGTGGTGCAAGCTGCAGGGAACAATGGTCCAGCATCTTCAAGTGTAGTGTCATTCAGTCCCTGGAGTGTTGGTGTTGCCGCTAGCACCACAGACAGAAGGTACCCTGCTTCACTTCTTCTTGGAAATGGCTTAATACTCAATGGCGTGGGACTATCAGGTCCAAGTTTTGGAAATAGATCAGTTTTGCATAAGCTTGTTTTAGCTAAGGATgcagtaaaattaaatggaacAAGTCCAAGGACTCCGGAGTACGTAGAGGAGTGCCAACATCCAGAAGCTCTGGACCCTAATATTGTGTTGGGAAGTATCATTATCTGCACCTTCTCAGCGGGCTTCTATAATGGAACCTCAACTCTTGCGGCTATTATTGGCACCTCGAAGGCTCTAGGATTGGAGGGCTTTATTTTAGTTGCGAACCCAAGCTATGGTGATTATATTGCAGAGCCAATCCCTTTTGCTGTTTCTGGCATTTTGATCCCTAGTGTAGATGATGCCAAGGTTATATTACAGTATTATGAAGAACAAACAAAGAGGGATAAGAAAGGCACTGCCACAGAATTTGGTGCTATGGCAGCTGTGGGAGAAGGAAGAGTTGCCTCTTTCACAGGGAGGTCACCTGTAGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACATCAACAAAAATCCTGCAGATGTACTTAAACCTGATATTCTTGCTCCAGGGCACCAAATATGGGCAGCCTGGAGCCCCAACAGTGCCTTAGAACCTATGCTGAATGGGCACAATTTTGCATTATTATCTGGTACCAGCATGTCCACACCTCATGTGGCTGGAATAGCAGCACTTATCAAGCAATACAATCCATTATGGACTCCATCTATGATAGCATCTGCAATCTCAACAACAAGCTCAAAGTATGATAATCTTGGAGAGCATATGATGGCTGAAGGCTTTGAAGCCAACAGCTTGCTTCCCTCCACTCCTTTTGAATATGGGGCAGGCTTTGTGAACCCCAATTGTGCCATTGATCCAGGTTTGGTACTATCATCAGaaTATGTAGACTTCATCAGCTTCTTGTGCTCTTTGCCACACACGGACACGGATGCAATAATTGAAGCTACTGGAGAGCAATGCAATCATCCGTTTTCCTATCCATTCGGTCTAAACCTTCCTTCAGTAACAATATCTGCACTAAGAGGATCAGTTTCTGTGCGAAGAACTGTCATGAGTGTAGGGAACAACACAGAGACATATTTGGGCTCTGTTCTACCTCCAAATGGAACTAAAGTCGACCTTTATCCAACTTGGTTTACCGTAAGTCCACAAGGAACACAAGATCTGGAAATACAACTCAGTGTCACCCAACCAATGGCGAATTTTACCTTTGGTGAAATTGTTTTGACAGGAAATTTGAACCACATTGTAAGAATAACATTGTCAGTCTTGGCAGTTTCAGTGTAA 2469 0.4403 MARRSVASIALPSLSIFISMFLVAITCFQEERSIYLVLLEGDGLAFHEGSRDEDSSIVHPNSEASNAHAKHLLASHDLLLQSTLETGSYNKLHSYKHIINGFSVHTTPSQAARLRGRPGVKLVEKDRGAKKMTTYTPEFLSLPEGIWAQEGGDRNAGDGVVIGFVDSGINPLHPSFAYDPMHPFTSNLSRFEGACETGPLFPPCSCNGKIVAARYFSAGAEAAVTLNASKDFLSPFDADGHGSHVASVAAGNAGVPVVVNGFFYGKASGMAPRARIAVYKAIYPSVGTLADVIAAIDHAVLDGVDVLTLSVGPNEPPEDTLTFLSMFDISLLFARKAGVFVVQAAGNNGPASSSVVSFSPWSVGVAASTTDRRYPASLLLGNGLILNGVGLSGPSFGNRSVLHKLVLAKDAVKLNGTSPRTPEYVEECQHPEALDPNIVLGSIIICTFSAGFYNGTSTLAAIIGTSKALGLEGFILVANPSYGDYIAEPIPFAVSGILIPSVDDAKVILQYYEEQTKRDKKGTATEFGAMAAVGEGRVASFTGRSPVVSRFSSRGPDIIDINKNPADVLKPDILAPGHQIWAAWSPNSALEPMLNGHNFALLSGTSMSTPHVAGIAALIKQYNPLWTPSMIASAISTTSSKYDNLGEHMMAEGFEANSLLPSTPFEYGAGFVNPNCAIDPGLVLSSEYVDFISFLCSLPHTDTDAIIEATGEQCNHPFSYPFGLNLPSVTISALRGSVSVRRTVMSVGNNTETYLGSVLPPNGTKVDLYPTWFTVSPQGTQDLEIQLSVTQPMANFTFGEIVLTGNLNHIVRITLSVLAVSV 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0151 822 ProSitePatterns Serine proteases, subtilase family, histidine active site. 241 251 IPR022398 -
Ssu6g0151 822 Gene3D - 695 820 - -
Ssu6g0151 822 SUPERFAMILY Subtilisin-like 132 682 IPR036852 GO:0004252|GO:0006508
Ssu6g0151 822 Gene3D - 371 539 - -
Ssu6g0151 822 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 54 813 - -
Ssu6g0151 822 ProSiteProfiles Serine proteases, subtilase domain profile. 137 678 - -
Ssu6g0151 822 Pfam Subtilase family 157 643 IPR000209 GO:0006508|GO:0008236
Ssu6g0151 822 Pfam Peptidase inhibitor I9 61 127 IPR010259 -
Ssu6g0151 822 Pfam Fibronectin type-III domain 724 817 IPR041469 -
Ssu6g0151 822 Gene3D Peptidase S8/S53 domain 159 691 IPR036852 GO:0004252|GO:0006508
Ssu6g0151 822 CDD Peptidases_S8_3 130 640 IPR034197 -
Ssu6g0151 822 CDD PA_subtilisin_like 421 525 - -
Ssu6g0151 822 ProSitePatterns Serine proteases, subtilase family, serine active site. 604 614 IPR023828 -
Ssu6g0151 822 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 131 IPR037045 -
Ssu6g0151 822 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 162 173 IPR023827 -
Ssu6g0151 822 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Ssu6g0151 822 PRINTS Subtilisin serine protease family (S8) signature 237 250 IPR015500 -
Ssu6g0151 822 PRINTS Subtilisin serine protease family (S8) signature 603 619 IPR015500 -
Ssu6g0151 822 SUPERFAMILY Protease propeptides/inhibitors 83 127 - -
Ssu6g0151 822 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 54 813 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0151 Ssu-Chr6 2430851 2435887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0151 4 820 Subtilisin-like Serine Gene Family AT1G62340 60.479 0.0 990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0151 - - gmx:100798915 1400.19