Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0058 ATGTGTCTTGATAACAGGAATCCGCTAGGATATATTCATCCACCCACGACCGAGTTGCAGGTCAAGCCTGCTCCATGCATGGCAGCTTTCTCCTCTAGAGGGCCCAACACAGTCACACCACAGATCCTCAAGCCTGATATCACCGCTCCCGGTGTGAACATTATTGCTGCCTACTCAGAAGGGGTTAGCCCAACAGATATGGGCTTTGATAAGCGCAGGGTTCCTTTTATCACCATGTCTGGAACATCCATGTCTTGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACTCTCCACCCTGACTGGAGTCCAGCAGCTATTAAATCTGCAATAATGACATCTGCTAGGACAAGGGACAACACTGGTAAGCCAATGCTTGATGGGAATAATGTTAAGGCAACACCATTTGCCTATGGGTCTGGCCACATCAGACCAAATCGTGCCATGGATCCCGGGTTGGTGTATGACTTAAGCATCAATGATTACCTAAACTTTCTTTGTGTCTCTGGGTATAACCAGAGTCAGATACAAATGTTCTCTGGTGCTCATTATCGCTGTCCTGATATAATAAACATCCTGGATTTCAACTACCCAACAATAACAATACCAAAACTCTACGGGTCAGTTAGTTTGACCCGGAGGGTGAAAAATGTTGGGCCACCAGGCACTTATACTGCAAGCCTCAAAGTACCAGCAGGTCTTTCCATATCTGTGCAGCCTAATGTGTTGAAATTTGACAACATTGGTGAAGAGAAGAGCTTTAAGTTGACAGTGGAAATTACGAGACAAGGTGTGGCTACAGCATTTGGAGGTATAACTTGGTCAGATGGCAAACATCAAGTGAGGAGTCCAATTGTAGTGGGGGGCGTTAGAGGGTAG 882 0.4637 MCLDNRNPLGYIHPPTTELQVKPAPCMAAFSSRGPNTVTPQILKPDITAPGVNIIAAYSEGVSPTDMGFDKRRVPFITMSGTSMSCPHVAGVVGLLKTLHPDWSPAAIKSAIMTSARTRDNTGKPMLDGNNVKATPFAYGSGHIRPNRAMDPGLVYDLSINDYLNFLCVSGYNQSQIQMFSGAHYRCPDIINILDFNYPTITIPKLYGSVSLTRRVKNVGPPGTYTASLKVPAGLSISVQPNVLKFDNIGEEKSFKLTVEITRQGVATAFGGITWSDGKHQVRSPIVVGGVRG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0058 293 Pfam Fibronectin type-III domain 195 288 IPR041469 -
Ssu6g0058 293 SUPERFAMILY Subtilisin-like 24 154 IPR036852 GO:0004252|GO:0006508
Ssu6g0058 293 Gene3D - 167 290 - -
Ssu6g0058 293 PANTHER BNAC02G33520D PROTEIN 6 289 - -
Ssu6g0058 293 Gene3D - 5 19 - -
Ssu6g0058 293 ProSitePatterns Serine proteases, subtilase family, serine active site. 81 91 IPR023828 -
Ssu6g0058 293 Gene3D Peptidase S8/S53 domain 20 163 IPR036852 GO:0004252|GO:0006508
Ssu6g0058 293 ProSiteProfiles Serine proteases, subtilase domain profile. 1 150 - -
Ssu6g0058 293 PANTHER PEPTIDASE S8 6 289 - -
Ssu6g0058 293 Pfam Subtilase family 26 141 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0058 Ssu-Chr6 1136210 1137479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0058 6 288 Subtilisin-like Serine Gene Family AT5G59810 59.582 5.15e-119 357