Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0045 ATGGCAAGCGCAAGTGTCGGTGTAGAAGATAATAATGAGATGAAGCTGTATTCGTATTGGAGGAGCTCTTGTTCCTTCCGAGTCCGAATAGCTCTCAACCTCAAAGGGCTCAAATACGAGTATAAGCCCGTCAATCTGTTGAAGGGAGAACATTCTCGCCCCGAGTTTCTCCAGCTCAACCCTCTTGGTTTTGTTCCCGTTCTTGTGGATGGCCACCTTGTTCTTTATGACTCTTTCGCCATTATTATGTATTTGGAAGATAAGTATCCTCACAATCCTTTGCTTCCTCCTGATATTCATAAAAGAGCAATCAATTTCCAGGCTGCTAGTATTGTTTCCTCAACAATACAACCTCTTCATAATTTGAGTGTACTGAACTACATTGGAGAAAAAGTTGGCCCTGATGAAAAACTTCCTTGGGCCCAAAGTATAATTAGAAGAGGCTTTACAGCACTTGAAAAGCTATTGAAAGACCACACAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCGGATATATTTTTAGCACCTCAGTTAACTTCAGCATTTAAGAGATTCAACATTCACATGGTAGTATTCTGTCCTTGGTCTCATGTGAATCTTTTATGTGGAGGGATAAAGGATGTTAATAAAATGTGA 642 0.405 MASASVGVEDNNEMKLYSYWRSSCSFRVRIALNLKGLKYEYKPVNLLKGEHSRPEFLQLNPLGFVPVLVDGHLVLYDSFAIIMYLEDKYPHNPLLPPDIHKRAINFQAASIVSSTIQPLHNLSVLNYIGEKVGPDEKLPWAQSIIRRGFTALEKLLKDHTGRYATGDEVFLADIFLAPQLTSAFKRFNIHMVVFCPWSHVNLLCGGIKDVNKM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0045 213 CDD GST_N_Zeta 14 86 IPR034333 -
Ssu6g0045 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 93 IPR004045 -
Ssu6g0045 213 SUPERFAMILY GST C-terminal domain-like 93 189 IPR036282 -
Ssu6g0045 213 Pfam Glutathione S-transferase, C-terminal domain 141 184 - -
Ssu6g0045 213 Pfam Glutathione S-transferase, N-terminal domain 16 93 IPR004045 -
Ssu6g0045 213 SFLD Glutathione Transferase (cytosolic) 14 186 IPR040079 -
Ssu6g0045 213 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 11 200 - -
Ssu6g0045 213 PANTHER MALEYLACETOACETATE ISOMERASE 11 200 - -
Ssu6g0045 213 Gene3D Glutaredoxin 11 95 - -
Ssu6g0045 213 TIGRFAM maiA: maleylacetoacetate isomerase 15 201 IPR005955 GO:0003824|GO:0005737|GO:0009072
Ssu6g0045 213 SFLD Main (cytGST) 14 186 - -
Ssu6g0045 213 Gene3D - 96 209 - -
Ssu6g0045 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 98 213 IPR010987 -
Ssu6g0045 213 CDD GST_C_Zeta 100 191 IPR034330 -
Ssu6g0045 213 SUPERFAMILY Thioredoxin-like 12 96 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0045 Ssu-Chr6 965926 979898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0045 13 194 Glutathione S-transferase Gene Family AT2G02380 62.088 3.12e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0045 K01800 - gmx:547590 342.043