Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3545 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTACTGGATGATCTGCGGCTAAGGAAAGAACGAATGGCTTCATCTCAGAGGTCAAACCAATCCCACCATTTGCCCATAGATGCATATGCTTATACCAAGCAAACATACAGAGGATCCAGAAATACAAAAACTAACGAAATTGTCAGTTCCAGAACTGGGGAGATGCTGAATAGTTCTAGAAGAAGCCCCAGACCAGTAAACAGTGGACAAGTTTCAAGTCAGATGGTTCCATATGGGAAAAGTCAGAGCTCAAGGCAAACGGGTGACATGTCCCTTGCCCTGGCTTTTGCCTTTGAGAATGGAGGGAAACTAAGAAGGAATGATTCAATTATGAGTTTCCTTCACCAAATCAAAAGGGGAACATTGGAATTCAGCATGTCAGAAAGACAATTAGCTTCAACTAGCAACTATCCTATGCAAATAAATGAGATATCCAAAGGTGCACAGAAACTAAACCAGATATTGAGAGCCTGCTCCAATGGTCTTAACATGGACACATATTCAATACAATTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATGGGTCACAGTTTATGGTTACCCCGCAGAAAAAAAATCGAATCACGCTATTAGAGGAGGATAATGATGATGACAATGACACAAGGATGGAAATGCAACTGGCAAGACCAACTTTCTCTTTTGACAAGCATACTACTCAGAACATTCAACCACTTGGAAAGGCTATTTTCATGCAGAGGCCAATTACTCTTAACAACTCTAAGGAAGGCAGAAACTCAAATAATGAAACCAAAAATGTGAAGATACAAGTTTCTCAGAAGAAATCAACTAAAACTAGCTCTATCTCTACCTCTACCTCTGACATTAAGAATGTCAATGCTATTTCAGAAGGGAAAAACCAGAAAGCTCCCAACCCCGAGAAAGGCAGGATTCCCAATGTAATAGCCAAATTAATGGGGCTGGACAACCTTCCTGACAAAGTGGAAATGGAATCAAAACACATGATGCTacagaaaagagaaggaatctCACCCAAGCATACTGCAAAGGGAAGCACTAAGAAGACTGAACTGAAGAGCAAAGAAACAGATAATTTGATGCCTATGAAAAGCCAAAGAGTGATAGAAGCCTTCAAAATGCCTGCAACTCAGGATGAAGAGATGATATTTGGTGCAAATAGAAATTTGCTTGTCGAAAAGACCAGCTCTGAGGTTGCTGTTCAGAATGGAAAACCACTATGGAGGGACGTGGATGGAATAAAAGTACTGAAAGGATTTGACAAGCCCAGCATAAAAATGGACAAGCATACTAAAAGTTCCGCTCAAAAGAACCTTACTAGAGAAAGACAAAAGGATGTTCAAGAGATAGGAAGAAAACAGGATCACCCAAATAACAATAACAGGGAACAGAAAGGCATTGTAAAGGGCAGAACCAACGATCCAATTCTTAACAATATGCTGGCACAGCTGGAACAAGTGCATGAAAGATCAGAAGTAAAGTCCTCGATTCAGGAAGACAAGGAAATCAATGGAAATATTGTTCAGCCAGAGAAAAGACACACAAACAAGCACATCATGAACAATGAAAATAAGTCTCGGAACAATGTTGGAGTTCAAAAGTCATACGTACTCTCCAAAAATGGGCCTCATGAAGAAAAGCATCGCAGAGAACAACAACTCCAGCCGAGGGAAGAACAAATGTTGATGATGAGACCACAAGGAGGGAATGAACTGACATCTAAGAATTCACCAAAATCTCCTCATCAATTGATCAATCCTCACAAGAAGCAGCTATCCATGAAACAGGCCACACTGTTTAAGAAAAACTCTGGAGAAAAAAATGTTGCTGCTATGAAATCGGAAGCCTTTGTAACTAATCACTATGATCTAGTCAGAGATGAAGCGTCCAATGACACAAATGAGAAAGTAGAAGAAATTATCCATAGGAAGTCAGGCCAAATTTCCGCTCCAAGAGATCAAGCTAAACAAAGTGGCATCAACACTTTGATGGACGAAAAACACGTCTATAAACTGGCCAGCAACAAAATAAGGAATACCAGAAAGCAAAAAGTTGACATGCCTGGAAAGATTGATCAAGTGTTGACTAGAAGAAATGGAGCCAAGCTGATCACTAAACAAGGAAAACAACAGATTCCCACTTctgataaatttgaaattttgaatgaagcAGAACAAGAAAGGGTTAGCACGTTCAGAGAAACAGATGTACACATTATTAGCTCCAATGAACCAGTATCAGTGGCTGTGACTGAACCATTGGATGTGAGGCGCCAACCCCATAAAGAAGCTGAACTGCCTCGTATATTATCCAGTTCTGTTGGTGGGGAACTTCAAAGCCAACAAGAATTGGTAGCAATAGTTCCCAATGATTTGCATTGCCCAGATGTCCAATCATTGCAAGATCAAGCTGTTCCTGTGGCAGCAGATGAAGGATCCATGACTGGTGAAGTTGCATTACATAAAACAAATGGAATTCAGGAAGACAGATTGTGTGTTAACCACTCAAACCTACAAGATCAGAATAATTCTGAAATAAGCATCCAACAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTTTGGTCATGAGTCAACTATTTGTCAACACTGCAGAAGCACTTTTCAAACTCAGCATCCCGTTTAACGTTCTTCAAGGTGGTGGACGGGAGAATCAAGACGAAGGCAGCAAACTCATATTAGATTGTGGGTATGAAGTGATGAAAAGAAAGGGGATACGACAGGAACTCAAAGTTCATAGTTATTCAAGGATATCGATGGGTACCATGAACATAATATCCTTAGATGACCTGGTTAGGCGGCTGAATAAAGACATGGAGAAGCTTAAATTCTACGGAAGGAAAAAAAGTTGCCAAGTTGATGTTGAGGACTACCTGCCTAAAATGCTCGAACATGATGTTTATGATAGAGATCCAGACGTGAACTGCATGTGGGATTTAGGTTGGAATGATGAGACAGTTGCATTTATCGAGAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTTAGTGTTCTTCTGGATGAGATCACCGTAGATTTTTGCATGTTCAACCAGGATTGA 3156 0.3986 MAKRSDFAQKLLDDLRLRKERMASSQRSNQSHHLPIDAYAYTKQTYRGSRNTKTNEIVSSRTGEMLNSSRRSPRPVNSGQVSSQMVPYGKSQSSRQTGDMSLALAFAFENGGKLRRNDSIMSFLHQIKRGTLEFSMSERQLASTSNYPMQINEISKGAQKLNQILRACSNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNGSQFMVTPQKKNRITLLEEDNDDDNDTRMEMQLARPTFSFDKHTTQNIQPLGKAIFMQRPITLNNSKEGRNSNNETKNVKIQVSQKKSTKTSSISTSTSDIKNVNAISEGKNQKAPNPEKGRIPNVIAKLMGLDNLPDKVEMESKHMMLQKREGISPKHTAKGSTKKTELKSKETDNLMPMKSQRVIEAFKMPATQDEEMIFGANRNLLVEKTSSEVAVQNGKPLWRDVDGIKVLKGFDKPSIKMDKHTKSSAQKNLTRERQKDVQEIGRKQDHPNNNNREQKGIVKGRTNDPILNNMLAQLEQVHERSEVKSSIQEDKEINGNIVQPEKRHTNKHIMNNENKSRNNVGVQKSYVLSKNGPHEEKHRREQQLQPREEQMLMMRPQGGNELTSKNSPKSPHQLINPHKKQLSMKQATLFKKNSGEKNVAAMKSEAFVTNHYDLVRDEASNDTNEKVEEIIHRKSGQISAPRDQAKQSGINTLMDEKHVYKLASNKIRNTRKQKVDMPGKIDQVLTRRNGAKLITKQGKQQIPTSDKFEILNEAEQERVSTFRETDVHIISSNEPVSVAVTEPLDVRRQPHKEAELPRILSSSVGGELQSQQELVAIVPNDLHCPDVQSLQDQAVPVAADEGSMTGEVALHKTNGIQEDRLCVNHSNLQDQNNSEISIQQPLTESENCLKWILVMSQLFVNTAEALFKLSIPFNVLQGGGRENQDEGSKLILDCGYEVMKRKGIRQELKVHSYSRISMGTMNIISLDDLVRRLNKDMEKLKFYGRKKSCQVDVEDYLPKMLEHDVYDRDPDVNCMWDLGWNDETVAFIEKYDVIRDTEKHILSVLLDEITVDFCMFNQD 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3545 1051 MobiDBLite consensus disorder prediction 590 613 - -
Ssu5g3545 1051 MobiDBLite consensus disorder prediction 447 495 - -
Ssu5g3545 1051 PANTHER EXPRESSED PROTEIN 1 1046 - -
Ssu5g3545 1051 MobiDBLite consensus disorder prediction 447 484 - -
Ssu5g3545 1051 PANTHER OS01G0228800 PROTEIN-RELATED 1 1046 - -
Ssu5g3545 1051 Pfam DUF761-associated sequence motif 326 343 IPR032795 -
Ssu5g3545 1051 MobiDBLite consensus disorder prediction 45 94 - -
Ssu5g3545 1051 MobiDBLite consensus disorder prediction 268 301 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3545 1 389 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 36.881 3.98e-50 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3545 - - gmx:102668494 1652.49