Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3518 ATGCTTTATGAGGAGAGAAGTTCTTCTAAGATCATAGCCGATTCAAGAGCACGAAGGGCCATCGAGAAACACAAGATCTGTCActatttaatattgttcttgGCCCTCTTTGGTTCCTGTATGACGATTGGGGACGCAGTGCTCACTCCAGCACTTTCAGTGTACTCAGCTTCGACTGGCGTTCAGAGATCCTTGTCAGACATATTGAGTGACATATTAGCCTCCTCACCAGATACTCAGGACTCCGTGTCAAAGGCTCTAAGATATGTACCTGTTCCCTCTGCGTGTGTTATTTTGGTTGGCCTGTTCATGCTGCAGCATTACGGTACACGTAAAATTGGGATCATCTTTGCTCCAATCATTGCTGCTTGGCTATTGTTTGCTGCTGCGGTGGGAACATATAACGTTTTCCACTGGGAtgtaaaaattatctataaaacATCCCCAGTATACATATACAAATTCATCAGAAATATTGACATCCACAGATGGAGGTTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCCGAGGCAATGTTTGCAGACCTAGGCCATTTCTCCAAGAAATCAATCAAGATTACGTTTATATGCTTGATCTATCCGCTTCTTCTTTTATGCTATGCTGGTCAGGCTGCATATATCTCCAAAAATTTAACTGCTCAAGATTTTAATCATCTTAGTCAATCTATGCCACGTCATTGCAAACACTTGTTCATAGTATTATCCCTACTTTCTTCAGCTGTGGGAAGCCAAGCAACCATAACAGCGTGTTTCTCCATCATTAACCAGTGCCTCGCATTAAATTGCTTTCCCAGAGTAAAAGTTATTCACACATCAAAAACAATACATGGGCAGATTTACATCCCCGATGTCAACTGGTTATTGATGATTTTCAGTCTCACTGTCACGGTTGGTTTCAGAGACATTGTGAAAATTGGCAATGCAACAGCTTTGGCTATAATCTGTGGAATGCTTGTGACAACTAGTCTGATGTCACTGATCATTGCTTTGTATTGGGAGAAGAATTTGATGGTATCTGCATGCTTCCTTGTATGTTTTGGCTTCCTTGAGGCTGCATATCTTTCAGCATGTCTGCTACAATTCCACAAGGGAGCTTGGTATCTGGTTGTCCTATTGGCAGTGTCCATGACAATTATGCTTTCATGGCATTATGGAAATATGAAGAAGTATGAGTTTGATTTGCAAAACAAGGTATCAACCGAATGGCTAATAGATATTAGTCCAGGCCTTGGGATTTCCAGGGTACCAGGAATTGGCTTCATTTACACTGACATAGTAGCAGGAATCCCAGCTTTCTTTTCACATTTCATCACTAATCTCCCTGCATTTCATCAAGTGTTGATCTTGGTGTCCTTCAAGTCTATACCGGTGCCTTATGTCCCAGAAAGTGAAAGGTATCTCATAGGTAGGGTTGGGCCAAAGGATTGTAAAATATATCGTTGCATTGTCAGAAGTGGATATTGTGATCACATAAGGGACACGGGTGATTTTGAGGAGCAGATTATTCGATCTATAGGGGAATTCATTTCCATTGAACAGAATGACATTGAATCCATGGTTTCCCCAGATGAAAGAATGATAGTTGTTGGAAATTCAGCACTTGATGGAAATGCTTTAGTTCCTCTTGATGAAGTTGACTCATGCATGTCGGTGAACAATGAATCTCAGATAAGTCCAGTAGATGACACATTGAGTAGCAGCAATCGTGTTAACAGGAGAAAAAAGGTTCGGTTCATGTTGCCTGATAATAGTCCTAAAATGCAGGTATCTGTAAGGAAGGAGCTCTTGGAGCTAATTGATGCCAGGGAGAGTGGCAGTGCCTATTTCTTGGGCCAGTCACATTTAGTGGTGCGTGATGGCTCAAACTTTCTCAAGAGATTCTTAATCATGGTCTATCGTTTCAGTGAAAAAAATTGTCGGGAATCTCCTGTAGCTCTTAAAATCCCTCATGCTGCTCTTGTAGAAGTTGGAATGGTATGTACTATATAA 2013 0.4083 MLYEERSSSKIIADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASTGVQRSLSDILSDILASSPDTQDSVSKALRYVPVPSACVILVGLFMLQHYGTRKIGIIFAPIIAAWLLFAAAVGTYNVFHWDVKIIYKTSPVYIYKFIRNIDIHRWRLLGSVILCVAGSEAMFADLGHFSKKSIKITFICLIYPLLLLCYAGQAAYISKNLTAQDFNHLSQSMPRHCKHLFIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTIHGQIYIPDVNWLLMIFSLTVTVGFRDIVKIGNATALAIICGMLVTTSLMSLIIALYWEKNLMVSACFLVCFGFLEAAYLSACLLQFHKGAWYLVVLLAVSMTIMLSWHYGNMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYVPESERYLIGRVGPKDCKIYRCIVRSGYCDHIRDTGDFEEQIIRSIGEFISIEQNDIESMVSPDERMIVVGNSALDGNALVPLDEVDSCMSVNNESQISPVDDTLSSSNRVNRRKKVRFMLPDNSPKMQVSVRKELLELIDARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCRESPVALKIPHAALVEVGMVCTI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3518 670 PANTHER POTASSIUM TRANSPORTER 2 669 - -
Ssu5g3518 670 TIGRFAM kup: potassium uptake protein 15 670 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g3518 670 Pfam K+ potassium transporter 20 496 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g3518 670 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3518 Ssu-Chr5 86177712 86181098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3518 18 670 Inorganic Solute Cotransporters AT1G70300 45.000 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3518 K03549 K12236 gmx:100801073 1206.43