Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3513 ATGATAGCTGCAACTGCAACATGGTATTCAAGGGCAGATTCTTCTCCTCCAAGAAATCCGATTGCGATGGCTCCCGATCCCCCTCCGGCTCCAGATCCGGCAGGAAAGTCCACCAATAACACTGGCCATGCCACTGTCCCTGCCGCACCTTCCCGCCTACAACACGGACAATCCTCCTCCCAATCAGGGAGACAGGAATCATCATGGGCTCAGTCTGGAGGCTTACGAAGTGCAGATTTTAGCTCACCAGAGACAGGATATGATTATGAAAACTCAGATGAGTCAGAATCTCCTCGTTTTCAAGCTATTTTACGTGTCACAAGTGCACCCAGAAAGAGGTTTCCTGGGGATATTAAGAGTTTTTCACATGAGTTGAAGTCCAAAGGTGTGCGGCCATTTCCATTTTGGAAGCCTCGGAGGTTAAATAAAGGAGATCTTGGTTGTTCTTCGGGCAAAATTTGA 462 0.4827 MIAATATWYSRADSSPPRNPIAMAPDPPPAPDPAGKSTNNTGHATVPAAPSRLQHGQSSSQSGRQESSWAQSGGLRSADFSSPETGYDYENSDESESPRFQAILRVTSAPRKRFPGDIKSFSHELKSKGVRPFPFWKPRRLNKGDLGCSSGKI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3513 153 MobiDBLite consensus disorder prediction 35 88 - -
Ssu5g3513 153 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 39 145 - -
Ssu5g3513 153 MobiDBLite consensus disorder prediction 20 34 - -
Ssu5g3513 153 MobiDBLite consensus disorder prediction 1 101 - -
Ssu5g3513 153 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3513 Ssu-Chr5 86084438 86085457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3513 45 142 AGC Kinase Gene Family AT3G17850 68.367 2.94e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3513 - - cam:101496611 152.525