Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3348 ATGTCCCTGCGGCTCGGACAGGTCCCAACCGTTGTGGTCTCGTCCTCGGAGGCCGCGGCCCAATTCCTCAAGACGCACGACGCCGTTTTCGCGAGCCGGCCCAGACTCGAAGCCGTCAACTACATCGCTTACGGCTCCAAGGGGTTGGTGTTCTCGGAATACGGTTCGTACTGGCGCCACATGAGGAAAGTGTGCACGCTTCAACTTCTGAGCGCGTCAAAGGTCGAGTCCTTTGCGCCTTCGCGGAAGAGGGAGCTGGAACTGGCGGTGAAGTCGCTCGAGAAAGCCGCGATCGTGGGCGAGGTCGTGGACCTCAGCGAGGTGGTGCACAACGTTGTGGAGGATATTGTGTACAACATGGTGTTGGGGTGTAGCAAGGACGATGAGTTTGATTTGAAGGGGTTGGTTCAAAATGCGATGAACCTTGGTGGTGTGTTTAATCTAGCAGATTATGTGCCTTGGCTTGGAGCTCTGGATCTCCAGGGATTAAAAAGAAGGTTCAAGAAAGTTAGTAAAGCACTTGACCAAGTGCTGGAGAAGATAATTAAGGAGCATGAACAAGAGTGTATTGGACATGGCATTCTAGCGATGCATGGGATCCTGGAATTTAATGGCATGCAGCAACCATCTGTCCATGCTCATTATTTTCCTCAGCAGGGGTCTTTTCATCTATCAACGATGTTGCAAAAGCACTATAGTGGCttgaatAGTAAAGATGAGCGAAAACACCCCCCAGGTCCACCAGGCCTTCCGGTAATCGGTAACCTCCACATGTTGGGGAAGCTCCCCCACCGCACCCTTCAAGCTTAG 810 0.5222 MSLRLGQVPTVVVSSSEAAAQFLKTHDAVFASRPRLEAVNYIAYGSKGLVFSEYGSYWRHMRKVCTLQLLSASKVESFAPSRKRELELAVKSLEKAAIVGEVVDLSEVVHNVVEDIVYNMVLGCSKDDEFDLKGLVQNAMNLGGVFNLADYVPWLGALDLQGLKRRFKKVSKALDQVLEKIIKEHEQECIGHGILAMHGILEFNGMQQPSVHAHYFPQQGSFHLSTMLQKHYSGLNSKDERKHPPGPPGLPVIGNLHMLGKLPHRTLQA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3348 269 PANTHER CYTOCHROME P450 93A3-LIKE 1 188 - -
Ssu5g3348 269 Coils Coil 160 180 - -
Ssu5g3348 269 PANTHER CYTOCHROME P450 FAMILY PROTEIN 236 268 - -
Ssu5g3348 269 PANTHER CYTOCHROME P450 93A3-LIKE 236 268 - -
Ssu5g3348 269 Gene3D Cytochrome P450 1 205 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3348 269 Pfam Cytochrome P450 2 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3348 269 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 188 - -
Ssu5g3348 269 SUPERFAMILY Cytochrome P450 2 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3348 269 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3348 Ssu-Chr5 83193322 83199673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3348 1 187 Cytochrome P450 AT3G48310 39.362 2.47e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3348 - - gmx:100814172 289.271