Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3324 ATGGAAAACCAAAACCGTCTCAAACTGCGAATCTCTCGCATATTCCGCTCCTCGTTCGGTTCGTGCCGGACCCGTAACATAACGGATGTAATGGAAAAAGCGGTGTTTGCACCACCGAACCAACCACCCTCCCCCAAAACGCGACCCTTTCCCCCGACTTGTAGGCCCAAAACCATCAACGACACTTGCATGGTGTCGTTTAAGGATTCTCTCCCCAGACGCAAAATCTCGGAGTGGTCATCACCCTTTGGCAATAACAACAACCTCAGCCTCAACCTCAACCTCGGTGTCATGTCGTGCCCCCCCACTTCCCCAAACAGTTCTCTCAACACAATCCACGAACACGGTTTCGGTTTCGACGACAAAAATAAGGTTTCAACTAAAAACTCGaggagcaagaagaagaagaagagacgTGCCCAGAAGAAAAGGGactttttcccttttaattCATGCGCCAAAGACGCCAACTTTGGTGGGTACTGGTGGTATAGCAGCGAGGAAGACGACGAAACCGACACCCTCTTCTCTTCGAGGAGCCTATCCTCTGACTCCTCCCGGTCCCGGCGCCGGAAAAGTGATCGGAGCTCCGACATGGGTCTTCTGCCTCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCGAGCGACCCTTACAGTGATTTCAGGACTTCGATGCTGGAAATGATCGTGGAGAAGCAGATTTTCTCGCCGGGGGATTTGGAGAATCTGTTGCAGTGTTTTCTGTCGCTGAATTCGTATCACCATCATAAGATCATTGTCCAAGTCTTCGCGGAGATTTGGGAGGCTCTGTTCTCTGACTGGTTTTCGTATTAg 846 0.4917 MENQNRLKLRISRIFRSSFGSCRTRNITDVMEKAVFAPPNQPPSPKTRPFPPTCRPKTINDTCMVSFKDSLPRRKISEWSSPFGNNNNLSLNLNLGVMSCPPTSPNSSLNTIHEHGFGFDDKNKVSTKNSRSKKKKKRRAQKKRDFFPFNSCAKDANFGGYWWYSSEEDDETDTLFSSRSLSSDSSRSRRRKSDRSSDMGLLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPGDLENLLQCFLSLNSYHHHKIIVQVFAEIWEALFSDWFSY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3324 281 MobiDBLite consensus disorder prediction 184 198 - -
Ssu5g3324 281 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 4 277 - -
Ssu5g3324 281 MobiDBLite consensus disorder prediction 176 202 - -
Ssu5g3324 281 MobiDBLite consensus disorder prediction 35 55 - -
Ssu5g3324 281 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 277 IPR038933 GO:0045892
Ssu5g3324 281 MobiDBLite consensus disorder prediction 128 142 - -
Ssu5g3324 281 Pfam Transcriptional repressor, ovate 218 275 IPR006458 -
Ssu5g3324 281 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 212 275 IPR006458 -
Ssu5g3324 281 MobiDBLite consensus disorder prediction 38 52 - -
Ssu5g3324 281 ProSiteProfiles OVATE domain profile. 214 273 IPR006458 -
Ssu5g3324 281 MobiDBLite consensus disorder prediction 102 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3324 Ssu-Chr5 82630437 82631282 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu5g3324 Ovate 4.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3324 - - gmx:100776613 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3324 5 82630437 82631282 Ssu5g3324 5 82630437 82631282 ECH