Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3316 ATGAAGAACCAAAGCCCTGTTGCTGAGCCTGAACCAGCTACACTAACTGTTGAACAAATCAGGCAGGGAGATGAGAAGCAAAATTCCACTGACATTGGAATCGCCACTACACTAGAAGATGAACTCCTAATGGTGTGTGAAGCAGATGCCTGCATAAAAACCATTGGAGAAAAATGCAAGCAGAGGAAGAGTTCTTCAGGCGATGGCATTATACTGCTCAAATCTGAACATCAAAATGATGCTATCACTGCTTATAACATTAATGCTGATAAAGAGGGGACTGAGCtgaaacattttcttttaaccaGTCCATCATTCATTGGACATGCAAAGAAGCTCTTCAATCTTAATGTTGATTGTCCCAACATCCCACTAAAGGATGAAACTAATTATGGCATGGCCAATCTCAGGCTTTATTTGGATTGTGCATATGAACTCACTGAGCGCAAAAGCCTTCAAGAGTCACAAGTGGTTCTTTCTTTCTTGCTAGCCTGTGGGGGGAACTCAACATTACACGTCTCCTTAGGCAGGTTGGTTGAAGAAATCTGTAATGGCATTGAGAATCTGAAATTTTACAGAGAAAATTCTGGGGAGAAAGTTTTTGCGGGCAATGTCTTTGCTATGATGGAGAAAGACATGAAGTGCAATGGAGTGGTAAATAGTATGTGGGAGGGGGGTTGGAAGCGAGGATTTTCTGCAGATGAGGCTGAGCTAGTTGTCAATAAAATAGAGAGCATGCTTGTAAGTGGATTAATTGAGgaggttattataaatttatga 780 0.3987 MKNQSPVAEPEPATLTVEQIRQGDEKQNSTDIGIATTLEDELLMVCEADACIKTIGEKCKQRKSSSGDGIILLKSEHQNDAITAYNINADKEGTELKHFLLTSPSFIGHAKKLFNLNVDCPNIPLKDETNYGMANLRLYLDCAYELTERKSLQESQVVLSFLLACGGNSTLHVSLGRLVEEICNGIENLKFYRENSGEKVFAGNVFAMMEKDMKCNGVVNSMWEGGWKRGFSADEAELVVNKIESMLVSGLIEEVIINL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3316 259 MobiDBLite consensus disorder prediction 1 28 - -
Ssu5g3316 259 PANTHER OS01G0228800 PROTEIN-RELATED 2 257 - -
Ssu5g3316 259 PANTHER OS01G0228800 PROTEIN 2 257 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3316 96 256 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 33.908 4.05e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3316 - - gmx:102663814 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3316 5 82476163 82477605 Ssu5g3315 5 82474516 82476024 PCT