Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu5g3311 | ATGGGGGAAGGTGAAGGTGAAGGTGAGGGGAGTGATTGCGCTCCCAATAATGTCTCAAACGACGTCGTTGCGAATGCGCTGTTGCCGTCCGATGTTCCCACCAAGAAGCTTGCCAGGCAGCTCGATTTTACCGGCTTCGGCGGGATGCAGGCGGCGGCGGCGGCTGCGCCTTCGTCGCAGCCGCCTCCTGCTTCCGTCAGGGTTGGGAAACCAGAATCTCCAAAATCGAGATCGAGGCCTGGCTTTGAAATTAAAGAAGCTACTCCAAAGAAACAGAAGCAGTGCAATTGTAAGCATTCAAAATGCTTGAAGCTATATTGTGAATGTTTTGCTTCGGGAATATATTGTGATGGGTGCAACTGTGTCAATTGTTATAACAAtgtggaaaatgaagctgctagaCGAGAAGCGGTTGAAGCTACTTTGGAACGCAATCCAAATGCATTTAGGCCAAAAATTGCGAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGATGCTGGGGAAGTTTTGATATTGGGAAAGCACAACAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTTCATGGAGATCAAAATAACAACATGGTGTATATTCAGCAGGCAGCCAATGCCGCTATAACTGGAGCTATTGGTTCCTCTGGTTATTCATCACCACCaatatcaaagaaaagaaaaggtcaaGAACTCTTATTTGGCCAAACCGTCAAGGATCCATCAGTTGGCAGGCTGGGACAACAGGCGAACAATGTCAGAGTTCCTGCACCCTCCTCATCCTTGTCTCCTATGCCAAGTGCTCGTGTTGGACCTGCAACATTAGGTCCTTCAAAATTAATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTGAAGGAACTTTGCTCAGTTCTGGTGCTAGTATCTGGACAAGCCGCTAAGACATTTACAGACCAGAAAAATTTAATGGATAAGCATGCAGAAGATCAGACAGAAACATCTCTTGCTTCTTCAACTCAGGAGCAAATGCCAAGCCAAAAGGAAGCTAATGTTGAGAAAGCTATGGCTGATGATGATTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAACTCTTGTTCAGATGGTGCTGATGTCCCTAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGTGATGAGCAAGATACAATGTTCATGACTGCTGCCTCCCCTGTTGGATCAAGGCCGCATGCTTGCACCACATCTTTGCAACCGCCTTATGGACAAGGAATGACAGAGGTCTATGCAGAGCAAGAAAGGATTGTATTGACGAAATTTAGAGATTTTCTCAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTTGCCAGAAGTGAATTAGAGAGTCAAAAGGACCCAAACATCAATTGTAATGGAAATGCCAGTACGGAGACAGCGCATCAGCAGGGAGCCACTAATAAGGTTGTTGCCAAAGCTGCAGGCAACTCCGTTACTTCTACATCATTGTACCCTGGTAGTCTTGTTCCTGACAATGGGGAAACTTATCCGAAGGTTGAAAAATAG | 1683 | 0.4421 | MGEGEGEGEGSDCAPNNVSNDVVANALLPSDVPTKKLARQLDFTGFGGMQAAAAAAPSSQPPPASVRVGKPESPKSRSRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSGYSSPPISKKRKGQELLFGQTVKDPSVGRLGQQANNVRVPAPSSSLSPMPSARVGPATLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFTDQKNLMDKHAEDQTETSLASSTQEQMPSQKEANVEKAMADDDCSSANQTDKISPDNSCSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPVGSRPHACTTSLQPPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSFARSELESQKDPNINCNGNASTETAHQQGATNKVVAKAAGNSVTSTSLYPGSLVPDNGETYPKVEK | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu5g3311 | 560 | MobiDBLite | consensus disorder prediction | 538 | 560 | - | - | |
Ssu5g3311 | 560 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 | 57 | 533 | - | - | |
Ssu5g3311 | 560 | MobiDBLite | consensus disorder prediction | 389 | 403 | - | - | |
Ssu5g3311 | 560 | ProSiteProfiles | CRC domain profile. | 91 | 215 | IPR005172 | - | |
Ssu5g3311 | 560 | MobiDBLite | consensus disorder prediction | 353 | 422 | - | - | |
Ssu5g3311 | 560 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 178 | 212 | IPR005172 | - | |
Ssu5g3311 | 560 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 92 | 127 | IPR005172 | - | |
Ssu5g3311 | 560 | PANTHER | TESMIN/TSO1-RELATED | 57 | 533 | IPR028307 | - | |
Ssu5g3311 | 560 | MobiDBLite | consensus disorder prediction | 51 | 83 | - | - | |
Ssu5g3311 | 560 | SMART | CXC_2 | 90 | 130 | IPR033467 | - | |
Ssu5g3311 | 560 | SMART | CXC_2 | 175 | 216 | IPR033467 | - | |
Ssu5g3311 | 560 | Coils | Coil | 125 | 145 | - | - | |
Ssu5g3311 | 560 | MobiDBLite | consensus disorder prediction | 362 | 377 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu5g3311 | Ssu-Chr5 | 82430669 | 82436639 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu5g3311 | 32 | 501 | CPP Transcription Factor Family | AT4G29000 | 58.206 | 0.0 | 568 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | CPP | Ssu5g3311 | TCR | 2.9e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu5g3311 | - | - | gmx:100786353 | 965.681 |