Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3231 ATGGGGAGGAGGATACTGAATGATGCGTTGAGGAGTATGGTGAATGCGGAGAGGAGAGGGAAAGCTACGGTGGAACTCGGGCCAATCTCCACTGTTATCTCTTCCTTTCTCCGCATCATGAAACACCATGGGTATGTCAAGGACTTTCAAGTCTATGAACCGCACAGAGTGGGGAGGATAACGGTTGAACTACAAGGTAGGATTAACGATTGCAAGGCCCTTACATACCGGAAGGACATTAAGGCAAGGGATATTGAAGCCTACAGATTGCGGACTCTTCCAACGCATCAGTGGGGTTATGTTGTGATTACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCGATTAAGAGGAATTTAGGTGGCCAGGTTCTTGGTTACTTTCACTAA 390 0.4692 MGRRILNDALRSMVNAERRGKATVELGPISTVISSFLRIMKHHGYVKDFQVYEPHRVGRITVELQGRINDCKALTYRKDIKARDIEAYRLRTLPTHQWGYVVITTPDGVLDHEEAIKRNLGGQVLGYFH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3231 129 Gene3D - 2 68 - -
Ssu5g3231 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Ssu5g3231 129 Gene3D - 69 129 - -
Ssu5g3231 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Ssu5g3231 129 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Ssu5g3231 129 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 1 129 - -
Ssu5g3231 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3231 Ssu-Chr5 81133453 81134472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3231 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 80.620 7.79e-80 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3231 K02957 - gmx:100792186 243.047