Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3196 ATGGAGCTCTTCTACCTCACCCTGCTGCTCCTCTTTGTTTCTTTCGTGACCCTCTCCCTTTCCATCCTTTTCTACAAGCACAGGTCTCCATTCATGGCCCCGAACCTACCACCGGGAAGAACTGGTTACCCGGTGATCGGTGAGAGCCTGGAGTTCCTATCCACAGGGTGGAAGGGGCATCCTGAGAAGTTCATCTTCGACCGCATGATCAAGTACTCCTCCCATCTCTTTAAAACATCCATCCTCGGGGAACCGGCTGTGATATTCTGTGGGGCCGCGTGCAACAAGTTCTTGTTCTCCAACGAGAACAAGCTTGTGGCCGCATGGTGGCCTCAGAGTGTGAACAAAGTCTTCCCCACCACTCTTCAAACTAACTCCAAGGAAGAGTCCAGAAAGATGAGAAAGTTGCTCCCAAATTTTCTTAAGCCCGAACCGCTTCAACGCTACGTTGGCATCATGGACACCATAGCACAGAGGCATTTCGCTTCCTTTTGGGACAACAAGACGGAACTCACCGTCTATCCCTTGGCCAAGAGGTATACCTTTTTGTTGGCTTGTCGTTTGTTTATGAGCGTTGAGGACGTGAATCACGTAGCAAAATTCGAAAATCCTTTTCATCTGCTGGCGTCTGGAATCATATCAATGCCTATTGATCTTCCCGGAACGCCGTTCAACAAAGCAATCAAGGCAGCCAACGCCATCAGGAAGGAGCTGTTGAAGATCATTAGACAGAGGAAGGTGGATTTAGCTGAAGGGAAAGCATTGCCAACACAAGATATATTGTCTCACATGTTGCTAACATCTGATGAGAATGGACAGTTTATGAAAGAATTGGATGTTGCCGACAAGATTCTTGGCCTTTTGATTGGAGGTCATGACACTGCTAGTGCTGCATGCACTTTCATTGTCAAGTACCTCGCTGAACTCCCTCATATTTATGGTAAAGTCTATCAAGAGCAAATGGAAATTGCAAAATCGAAATCTCCAGGAGAATTATTGAATTGGGATGATGTCAACAGGATGAAATATTCTTGGAACGTAGCTTGTGAAGTAATGAGAATTGCTCCTCCACTTCAAGGAGCTTTTAGGGAGGCTATCAATGACTTTGTTTTTAATGGGTTCTCAATTCCAAAGGGATGGAAGTTGTATTGGAGTGCAAATGCTACACATAAAAATCCAGAATACTTTCCAGAGCCAGAGAAGTTCGATCCAACTAGATTCGAAGGAGAAGGGCCGGCACCTTATACTTTTGTACCATTTGGTGGAGGACCAAGGATGTGCCCCGGAAAAGAGTATGCTCGATTGGAAATATTGGTTTTCATGCACAACGTAGTGAAGAGGTACAAGTGGGAAAAATTGATTCCAGATGAGAAGATTATCGTTGATCCCTTGCCCATGCCTGCAAAGAACCTCCCAATTCGTCTTTACCCTCACAAAGCTTGA 1443 0.456 MELFYLTLLLLFVSFVTLSLSILFYKHRSPFMAPNLPPGRTGYPVIGESLEFLSTGWKGHPEKFIFDRMIKYSSHLFKTSILGEPAVIFCGAACNKFLFSNENKLVAAWWPQSVNKVFPTTLQTNSKEESRKMRKLLPNFLKPEPLQRYVGIMDTIAQRHFASFWDNKTELTVYPLAKRYTFLLACRLFMSVEDVNHVAKFENPFHLLASGIISMPIDLPGTPFNKAIKAANAIRKELLKIIRQRKVDLAEGKALPTQDILSHMLLTSDENGQFMKELDVADKILGLLIGGHDTASAACTFIVKYLAELPHIYGKVYQEQMEIAKSKSPGELLNWDDVNRMKYSWNVACEVMRIAPPLQGAFREAINDFVFNGFSIPKGWKLYWSANATHKNPEYFPEPEKFDPTRFEGEGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNVVKRYKWEKLIPDEKIIVDPLPMPAKNLPIRLYPHKA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3196 480 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 Pfam Cytochrome P450 37 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Ssu5g3196 480 Gene3D Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3196 480 PANTHER CYTOCHROME P450 26 9 476 - -
Ssu5g3196 480 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 9 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3196 Ssu-Chr5 80429039 80434792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3196 26 382 Cytochrome P450 AT5G36110 59.722 1.88e-152 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3196 K20667 - gmx:100801007 894.419