Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3195 ATGAGCGTTGAGGATGTGAATCACGtagcaaaatttgaaaaccctTTTCATCTGCTGGCGTCTGGAATCATATCAGTGCCTATTGATCTTCTCGGAACGCCGTTCAACACAGCAATCAAGGCAGCCAACGCCATCAGGAAGGAGCTGTTGGAGATCATTAGACAGAGGAAGGTGGATTTAGCTGAAGGAAAAGCATCACCAACACAAGACATATTGTCTCACATGTTGTTAACATGTGATGAGAATGAACAGTTTATGAATGAATTGGATATTGCCGACAAGATTCTTGGCCTTTTGATTGGAGGCCATGACATTGCTAGTGCTGCATGCACTTTCATTGTCAAATACCTTGCTGAACTCCCTCACGTTTATGACAAAGTCTATCAAGaaaaaaatgttttaatttggtttagATTTGAATTCAAGCTTTTCCGATTTGCAAAAGTAAGGGCGAGTCAAGACTGTCTGTAG 471 0.3885 MSVEDVNHVAKFENPFHLLASGIISVPIDLLGTPFNTAIKAANAIRKELLEIIRQRKVDLAEGKASPTQDILSHMLLTCDENEQFMNELDIADKILGLLIGGHDIASAACTFIVKYLAELPHVYDKVYQEKNVLIWFRFEFKLFRFAKVRASQDCL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3195 156 PANTHER CYTOCHROME P450 26 1 132 - -
Ssu5g3195 156 Pfam Cytochrome P450 27 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3195 156 Gene3D Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3195 156 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 1 132 - -
Ssu5g3195 156 SUPERFAMILY Cytochrome P450 22 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3195 Ssu-Chr5 80425333 80426953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3195 1 129 Cytochrome P450 AT5G36110 55.039 1.84e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3195 K20667 - gmx:100801007 243.432