Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3114 ATGGGAAGtggtagtggtgacaacaacaatgatagtggtggcggtggtaatacCAACGGTGATGGTGCCAACGGCAATGGTTGTGGTGGTACCGATGGTGATCGTGGCGGTGCcactggtgatggtggtgacattgcttatggtggtggcagcagcgctgGTAGTCGTGATCGTGGTCATCGTGGTGGTGGTAACGATGGTAAtagtgatgaagcttgtggtgatGGAGGCGATGTTGGTGgtcatggtagttgtggcagtagtgatgatggtggtgataccagtggtcgtggtagttaTGGCAGCAGTGATGGTGATGGCGGTgtcagtagtggtggtggtagtggtggtagcggtggtggtggtggtaatggtggttGCGAGATGGCAGCAACAATAGTGGTGACGGTGACAGTAATGGCAATTTCGTGGTCCCAATATACAGTTGGAATCCATTTTTCCTTTCCAAAAACGAGCGCAACGACAACGCTCTCTCTCTCAAAGCCAAAAACTCTTGCTCTGTTTTGTTCTGGCTTCGCTATGAGCTCAGATGTGAGTAGAGAACGAGGTGCATCAACCTTGgTGGAATGGAAATATCAATGTAAAGCACTTTTGTTTTTGGCATACCAGAGTTTAGGCTTTCTGTTTGGTGACTTGAGTTTATCCCCTCTTTATGTCTACCAAAGTATATTTTCTGGAAGACTGAAACAGGTCCAAAATGAGGATGCAATATTTGGTGCATTTTCTTTGATCTTTTGGACTCTctcaattatttctttgttgaaGTATGCCATTATCATGTTAAGTGCAGATGATAATGGTGAAGGAGGAATTGTTGCTTTGTATTCACACCTTTGCAGAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAGCTTCTGATGAGGAGCTTTCTACATATCGCAAACCTGGTTCCTCAAACAGAAATATACCACCCTCGCCTTTGAAAAAATTCATTGAGAAACACAAGAGTACAAAGACTgttttgcttatttttgttttactgGGTGCTTGCATGGTAATTTGTGTTGGTGCGCTCATGCCTGCCATTTCAGTTCTTTCATCTGTTGAAGGGCTGAAAATTGAAGCAAAGATTACAAACAGTAGTATGGTATCTCTTATTTCTTGTGTTCTACTGATTGGACTCTTTGTTCTGCAACACCGTGGCTCCTACAAGGTTGCATTCACGTTTCCTCCCATAATCATCCTATGGTTACTGTCTATTTTCATGATTGGCACTTACAATGTCGTCAAGTGGAATCCAAGAGTATATCAGGCTCTTTCtccatattatatatacaagttCTTTAGGCTTACAGGAAAAGATGGTTGGACTAATCTTGGAGGAGTATTTCTGTGTGTTACAGGAACTGAAGCTATGTTTGCAGACCTTGGGTACTACCGACAAGCACCTGTTAGGGTTGCATTTTGTGTTATTTACCCTTGTCTTGTACTTCAATACATGGGGCAGGCTGCTTTTCTTTCAAAGAATTTATCTGCAGTGCCTATAAGCTTTTATGCTTCTATTCCAGATTTTCTGTTTTGGCCAGTATTTGTGGTGGCTGCTTTGGCAGTAATAGTTGCAAGTCAGGCTGTCATCTCTTCAACATTCTCAATTGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGGGTTAAGGCAGTACACTCCAGAAGGTGGATCCCTGGTCAGACATATATACCAGAGATAAACTGGATTCTTATGATAATCAGCCTGGCTGTGACAGTTGGTTTAGGAGACATGATCCATATAGGATTCGCTTATGGGATTGCATATCTGATGGTGGTGTTTGTGACCACATGTTTGACATCACTAGTCATCAACCTTGTATGGCATAAAAGTCTTATAGTTGCTCTGGCATTTGCTTTATTCTTTGGTTCGATAGAGATTCTTTTCCTGTCATCCTATTGCATGAAAATCCCTAAAGGGGGCTGGATTCCACTCATGCTTTCTGCAGTTTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTaggaaaaagtatttatttgacATGCATAACAAAGTTTCAATGAGGTCGATCCTTACATTGGGTCCTAGTCTTGGGATTGTGAGGGTTCCAGGAATGGGCCTTATCTACACTGAATTGGCTACTGGAGTCCCTGCCAGTTTTACTCATTTCTTAACAAATCTGCCAGCTTTCTATCAAgtggttgtttttgtttgtgttaagACTGTACCTGTGCCTTCTGTGCCACACGAGGAACGTTACCTCATTGGCCGAATTGGTCCCAAATCTTACCGAATGTATCGGTGCATTGTTCGAAATGGCTATAAAGACGTGTATAGCcatgaaaatgattttgaaaatgaccTGGTGATGAGCATAGCAGAATTCATTCAATTGGAAGCAGAAGGTTGTTCTGGAAATGTAGATGGTTCAGTGGATGGCCGGATGGCAGTGGTTAGGACGTCAGGGAAGTTTGGGACAAGATTGCGAATGTCAGAATCTGCTGGTTTTGAAGAAGGCAGCAGTATTAGTCTTCCTGGAGCTTTGACTGTTACTAGCAGTAAATCTCCGACATTGAAGAAGCTGCAGGCCATGTATGAGCAGGAATCGCCTGAACTCAACACTAGACGACGGATTCGATTTGAGTTgctaaacataatatataaagatcCACGTGTCAAGGAAGAGCTCATGGAACTTGTAGAAGCCAAGCGTGCTGGAGCAGCGTATGTAATAGGTCATTCTCACGTAAAGGCCAAGTGGAACTCATCATTTGTAAGAAGTTTGCTATCAACCTCTATTCTTTTCTCCGAAAAAACTGCCGGTCCCCTGCAGTAG 2853 0.3733 MGSGSGDNNNDSGGGGNTNGDGANGNGCGGTDGDRGGATGDGGDIAYGGGSSAGSRDRGHRGGGNDGNSDEACGDGGDVGGHGSCGSSDDGGDTSGRGSYGSSDGDGGVSSGGGSGGSGGGGGNGGCEMAATIVVTVTVMAISWSQYTVGIHFSFPKTSATTTLSLSKPKTLALFCSGFAMSSDVSRERGASTLVEWKYQCKALLFLAYQSLGFLFGDLSLSPLYVYQSIFSGRLKQVQNEDAIFGAFSLIFWTLSIISLLKYAIIMLSADDNGEGGIVALYSHLCRNAKFCLLPNHQASDEELSTYRKPGSSNRNIPPSPLKKFIEKHKSTKTVLLIFVLLGACMVICVGALMPAISVLSSVEGLKIEAKITNSSMVSLISCVLLIGLFVLQHRGSYKVAFTFPPIIILWLLSIFMIGTYNVVKWNPRVYQALSPYYIYKFFRLTGKDGWTNLGGVFLCVTGTEAMFADLGYYRQAPVRVAFCVIYPCLVLQYMGQAAFLSKNLSAVPISFYASIPDFLFWPVFVVAALAVIVASQAVISSTFSIVQQCHAFECFPRVKAVHSRRWIPGQTYIPEINWILMIISLAVTVGLGDMIHIGFAYGIAYLMVVFVTTCLTSLVINLVWHKSLIVALAFALFFGSIEILFLSSYCMKIPKGGWIPLMLSAVFMVVMYVWHYGSRKKYLFDMHNKVSMRSILTLGPSLGIVRVPGMGLIYTELATGVPASFTHFLTNLPAFYQVVVFVCVKTVPVPSVPHEERYLIGRIGPKSYRMYRCIVRNGYKDVYSHENDFENDLVMSIAEFIQLEAEGCSGNVDGSVDGRMAVVRTSGKFGTRLRMSESAGFEEGSSISLPGALTVTSSKSPTLKKLQAMYEQESPELNTRRRIRFELLNIIYKDPRVKEELMELVEAKRAGAAYVIGHSHVKAKWNSSFVRSLLSTSILFSEKTAGPLQ 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3114 950 MobiDBLite consensus disorder prediction 88 109 - -
Ssu5g3114 950 Pfam K+ potassium transporter 209 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g3114 950 MobiDBLite consensus disorder prediction 1 25 - -
Ssu5g3114 950 MobiDBLite consensus disorder prediction 1 121 - -
Ssu5g3114 950 TIGRFAM kup: potassium uptake protein 207 938 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g3114 950 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 196 935 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu5g3114 950 PANTHER POTASSIUM TRANSPORTER 3 196 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3114 Ssu-Chr5 79212063 79222951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3114 194 935 Inorganic Solute Cotransporters AT4G23640 62.500 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3114 K03549 - gmx:100777998 1370.14