Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3070 ATGGACGCATCAACGGCTTTAATGATCCTATCCGCAATAGCGGCCTATTTAATATGGTTCACCATTGTCACTCGCTCCCTCAAAGGTCCACGTGTCTGGCCCCTATTGGGCAGCCTCCCCGGTCTCATCCAACACGCCAACCACATGCACGACTGGATCGCAGACAATCTCCGCGCGTGCGGCGGCACGTACCAAACCTGCATCTGCGCCCTCCCCTTCCTCGCCCGAAAACAGTGTCTCGTGACCGTCACGTGCGACCCCAAAAACCTCGAGCACATCCTCAAGCTCCGCTTCGACAACTACCCAAAAGGCCCCACGTGGCAGTCCGCGTTCCACGACCTCCTGGGCGAAGGCATCTTCAACTCCGACGGCGACACGTGGCTGTTCCAGCGCAAGACAGCCGCGCTGGAATTCACCACGCGCACCCTGCGCCAAGCCATGGCCCGTTGGGTGAACCGAGCCATAAAGCACAGGTTCTGCCCCATCCTAGCCGCGGCTCAGGAACAAAACAAGCCGGTGGATCTCCAAGACCTCTTGCTCCGGCTCACGTTCGACAACATATGCGGCTTGGCTTTCGGCCAAGACCCACAGACCCTAGCCGCGGACCTTCCAGAGAACGCTTTCGCTCTCTCCTTCGACCGCGCCACTGAAGCCACCTTACAACGCTTCATTCTCCCTGAAATCTTGTGGAAGCTGAAGCGATGGCTCCGGCTCGGAATGGAAGTGAGCCTGAGCCGAAGCCTCAAACACATCGACCAATACCTCTCCAGCATCATCGAGAAGCGTAAACTTGAACTGCTGAATGGGAGTGGGTCCCTCCACGACGACCTCCTATCCCGCTTCATGAGGAAAAAAGAGTCCTACACGGACGAGTTTCTCCAACACGTGGCACTCAACTTCATCCTCGCTGGACGCGACACGTCATCGGTCGCGCTCAGCTGGTTCTTCTGGCTCTGCACCAAGAACCCGCGCGTGGAGGAGAAAATCCTCACCGAGCTCTGCACCGTTCTGATGTCGACACGTGGCGAGGACGTTTCCACGTGGCTGGAGGAGCCGCTGGTGTTCGAGGAGGTCGATCGCTTGGTGTACCTGAAAGCAGCACTGTCCGAGACGCTGCGACTCTACCCCTCCGTGCCGGAGGATTCCAAGCACGTCGTGAACGACGACGTTTTGCCGAGCGGCACTTTCGTTCCCGCGGGTTCGATGGTGACGTATTCGATCTACTCGGTCGGGAGGATGAAGTTCATTTGGGGAGAGGATTGCCTCGAGTTTAAACCAGAACGGTGGCTCTCCCCCGAAGGGGATAAGATTCAGCTTCAAGACTCTTACAAGTTCGTTTCGTTCAACGCCGGACCGAGACTTTGCTTGGGGAAGGACTTGGCGTACTTGCAGATGAAGTCCATCGCCGCCGCGGTGCTGCTGCGCCACCGCCTCGCCGTCGCGCCGGGCCACCGCGTCGAGCAGAAGATGTCGCTCACGCTGTTCATGAAGTACGGGCTCAGGGTGAATGTGCTCCCCAGGGATCTCAAACCGCTGCTGGACAAAATAATTGCTCAGAAGTGA 1563 0.5809 MDASTALMILSAIAAYLIWFTIVTRSLKGPRVWPLLGSLPGLIQHANHMHDWIADNLRACGGTYQTCICALPFLARKQCLVTVTCDPKNLEHILKLRFDNYPKGPTWQSAFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILAAAQEQNKPVDLQDLLLRLTFDNICGLAFGQDPQTLAADLPENAFALSFDRATEATLQRFILPEILWKLKRWLRLGMEVSLSRSLKHIDQYLSSIIEKRKLELLNGSGSLHDDLLSRFMRKKESYTDEFLQHVALNFILAGRDTSSVALSWFFWLCTKNPRVEEKILTELCTVLMSTRGEDVSTWLEEPLVFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVNDDVLPSGTFVPAGSMVTYSIYSVGRMKFIWGEDCLEFKPERWLSPEGDKIQLQDSYKFVSFNAGPRLCLGKDLAYLQMKSIAAAVLLRHRLAVAPGHRVEQKMSLTLFMKYGLRVNVLPRDLKPLLDKIIAQK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3070 520 Pfam Cytochrome P450 28 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 SUPERFAMILY Cytochrome P450 22 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g3070 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Ssu5g3070 520 PANTHER CYTOCHROME P450 3 509 - -
Ssu5g3070 520 PANTHER CYTOCHROME P450 86A7 3 509 - -
Ssu5g3070 520 Gene3D Cytochrome P450 23 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3070 Ssu-Chr5 78232533 78234095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3070 1 520 Cytochrome P450 AT4G00360 73.664 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3070 K15398 K20544 gmx:100792719 979.933