Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2923 ATGGCATCTGCTATGGTTCGTAGGAGCATTATCACTCACTGCTCCAAATTTGCTTCTTCTTGGTCTTTGCTGTCTCGCCATTCCTCAATCCACAACCCTCTCTCCGTTTCCTCCTTTCATAGCCAAGCTGTTGGTGGAGGATTGCCATCTTACATGCGTGGAGCTGTGTATTGGGAACCCAACAAGCCTCTCATCATCGAGGAATTTCACATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACCAAGGCCTGTGGAGTATGCCACTCTGATCTACATGTTATGAAAGGTGAAATTCCGTTTTCCAGTCCTTGTGTTGTGGGGCATGAGATTACCGGTGAAGTTGTTGAACACGGACCACTCTCTGATAGCAAAATCATAGAAAGGCTTCCCGTTGGTTCTCGAGTTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAACCCTCTACGATGGCGAAACTCGACTCTTTCTTCGAAACAGTGGAAAACCGGTATTCATGTATAGTATGGGAGGGCTAGCTGAATACTGTGTTGTGCCTGCAAATGGAGTGTCTGTATTACCAGACTCATTGCCATATACAGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTACGGTGCTATGGCTCATGCAGCTCAAGTGCGTCCAGGTGATTCTGTTGCGGTTATTGGAACTGGAGGTGTTGGTTCTAGTTGTTTGCAGATAGCCAGAGCCTTTGGTGCCTCAGATATAATTGCTGTGGATGTTCAGGATGAAAAACTACAGAAAGCAAAGGCTTTTGGTGCTACTCACACTATAAATTCAGCAAAGGAAGATCCCATCGAAAAGATAATTGAAATTACTGGTGGAAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGGAAACCACAGACATTTGCTCAATGCACACAGAGTGTGAAGGATGGGGGAAAAGCCGTGATGATTGGACTTGCAAAAGCTGGTTCTTTAGGAGAGGTGGATATAAATCGGCTTGTTCGCAGAAAGATACAAGTTATTGGCTCATATGGAGGAAGGGCAAGGCAAGATCTTCCAAAGGTAATTAGATTGGCAGAAACGGGTATCTTCAATCTTGGCCATGCTGTTTCTAGAAGATACACCTTTGAGGAGGCAGGCAAAGCATTCCAAGATCTCAATGAAGGAAAAATTGTTGGTCGAGCTGTGATCGAGATAATATAA 1272 0.4552 MASAMVRRSIITHCSKFASSWSLLSRHSSIHNPLSVSSFHSQAVGGGLPSYMRGAVYWEPNKPLIIEEFHMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFSSPCVVGHEITGEVVEHGPLSDSKIIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRNSGKPVFMYSMGGLAEYCVVPANGVSVLPDSLPYTESAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKAFGATHTINSAKEDPIEKIIEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAKAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKVIRLAETGIFNLGHAVSRRYTFEEAGKAFQDLNEGKIVGRAVIEII 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2923 423 SUPERFAMILY GroES-like 48 255 IPR011032 -
Ssu5g2923 423 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 52 421 - -
Ssu5g2923 423 CDD Zn_ADH10 52 421 - -
Ssu5g2923 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 214 387 IPR036291 -
Ssu5g2923 423 Pfam Alcohol dehydrogenase GroES-like domain 77 207 IPR013154 -
Ssu5g2923 423 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 52 421 - -
Ssu5g2923 423 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 109 123 IPR002328 GO:0008270|GO:0016491
Ssu5g2923 423 SMART PKS_ER_names_mod 59 420 IPR020843 GO:0016491
Ssu5g2923 423 Pfam Zinc-binding dehydrogenase 252 383 IPR013149 -
Ssu5g2923 423 Gene3D - 56 412 - -
Ssu5g2923 423 Gene3D - 229 366 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2923 65 422 Monolignol Biosynthesis Gene Families AT4G37990 25.275 1.99e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2923 - - gmx:100802431 786.178