Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2904 ATGGTGGTGTCGGAGACAGGGGAGGCACGTCCGGAGGATGTTGGGAAGCACTCCCTAATGCGGCGAACTGGGTTGCCGGCGCGTGACCTTAGGATCCTCGATCCCATGCTGTCTTACCCTTCTTCCATCCTAGGACGCGAAAGAGCCATTGTTGTCAACTTGGAACATGTCAAAGGCATCATCACTGCCTCCGAGGTTCTCATGATCAACTCCTCCAACCCTTTGTATCTTCGCTTCCTTCAAGATCTTCACATTCGTCTTACTAATCAAACGCCCTCTCTGATGAGCAATGACATGGATGGTGAAGATTCTCGAAACGGTTCGCCTGTGAGAACATCTGAGGACTCTGATGCGTTTCAGGTAAGAGCGGATAGCCCTAAGATCAGTGCAGAGAAGGTAACAGGAGCACCAGCTCCTAAGCAGTTACCTTTTGAGTTCCGAGCACTTGAGACATGTATTGAATCTGCTTGCAGGTGCCTTGAATCTGAGATTTCAACATTGGAGGAAGAGGCTTACCCAGCTTTAGATGAATTGACCTCTCAACTTAGCACACTCAATCTTGAACGTGTAAGACACATCAAGAGTCGTTTGGTTGCACTTTCCGGTCGTGTGCAGAAGGTAGCAGATGAACTGGAACATTTGTTGGACGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTTAATGCTCGTTTATTGGATCAGGCATCATTAAAAGAAGAGTACAATTCTGAGTGTGAAGATAACGATCAAAGTGATGAATCGAATTCGGAAAAGTTTGACAAATTCCCTGGTCTTAAACTTGACGTTGAGGAATTGGAGATGCTTCTAGAAGCATATTTTGCACAGACAAATGGAATCTTGCAAAGATTGTCTAGTTTGAGTGAGTACGTGGATGACACGGAGGACTACATCAACATAATGTTGGATGATAAGCGAAATGAGCTTCTGCAGGTAGCAATAATATTCAACACCTTAAACATGATAGTTAATGCCGGTATTGTGGTTGTAGGATTGTTTGGCATGAATATTCAAATCACACTCTTTGATGGTAAACCTCGTCAATTTTGGGCTACAACTGGCGGTACATTTGGAGGATGTATACTTATATTCCTTGTATGTTTGTGGTGgggaagaaaaaatatttgctcTCTCAATAGAGGACAATTACTTGTAATCACTTTAAGAATTTATGAATAA 1206 0.4254 MVVSETGEARPEDVGKHSLMRRTGLPARDLRILDPMLSYPSSILGRERAIVVNLEHVKGIITASEVLMINSSNPLYLRFLQDLHIRLTNQTPSLMSNDMDGEDSRNGSPVRTSEDSDAFQVRADSPKISAEKVTGAPAPKQLPFEFRALETCIESACRCLESEISTLEEEAYPALDELTSQLSTLNLERVRHIKSRLVALSGRVQKVADELEHLLDDDNDMAEMYLTQKLNARLLDQASLKEEYNSECEDNDQSDESNSEKFDKFPGLKLDVEELEMLLEAYFAQTNGILQRLSSLSEYVDDTEDYINIMLDDKRNELLQVAIIFNTLNMIVNAGIVVVGLFGMNIQITLFDGKPRQFWATTGGTFGGCILIFLVCLWWGRKNICSLNRGQLLVITLRIYE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2904 401 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 383 IPR039204 -
Ssu5g2904 401 PANTHER MAGNESIUM TRANSPORTER MRS2-F 1 383 - -
Ssu5g2904 401 Gene3D - 1 72 - -
Ssu5g2904 401 CDD Mrs2_Mfm1p-like 1 382 IPR039204 -
Ssu5g2904 401 MobiDBLite consensus disorder prediction 92 124 - -
Ssu5g2904 401 Gene3D Magnesium transport protein CorA, transmembrane region 107 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2904 Ssu-Chr5 75603364 75606817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2904 1 389 MRS2 Gene Family AT3G19640 47.166 5.23e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2904 - K16075 gmx:100808805 621.698