Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2895 ATGTCTGTGGTTCCTTGCAATTGCAACCACACCACTGAAAAACATAAGTTTGGGTGTGAAAGTGAAAGCTTTCACAAGTTTTTTGAGTGCTGGATTTCTGAGCAAAACCAACATCTGAAGGACCTTTTAGCTGCTGAATCAACTCAGCCTACAGAAGAGCAAGTGCGGGAACTGAATGATAGGGTGGTTGAGCACTATAAGTACTACTACAAGGCCAAGTCAAGGTGTGCAAAGCAAGATGTGTTGGCCATGTTGTCCCCCACATGGATGAGTTCCTTGGAAGAGGCTTTTCTTTGGATTGGTGGATGGAGACCCAGCATGGCATTTCACTTGCTATATTCCAAGTCTGGTTTGCAATTTGAGGCCAGACTCAATGAGCTGATCCAGGGTCTAAGAACACATGATTTGGGAGACCTATCAGCCTCCCAACTTGCTCACTTAGATGAGATGCAAAGGAGGACCATCTTAGAGGAGAGGGAGATCACAGATTTGATGGCAAGGCACCAGGAGACAGTGGGTGATGCCTCAATGGTGGAGTTGTCTCATGTGGTTTCTGAGATGATTAGAGCCAATGAAGCAGGAGAGGTTGATGAGAATAAGGAAATAGAGGACAAGGTTGAATCAACTCTGGTGCCAAAGGAGGAAGGTTTGGAGAAGATCCTGCTGAAAGCTGATGAGCTAAGGTTGAGAACACTGAAGGCAATTGTTAATGTTCTGGCTCCAAAACAGGCTATTCACTTCTTAATTGCTGCTGTAGAGCTGCACCTGAGGCTGCATGAGTGGGGCAAGAAGATGGATGCCAGAAAATGCAATCCATGGTTTTGGTGA 828 0.4577 MSVVPCNCNHTTEKHKFGCESESFHKFFECWISEQNQHLKDLLAAESTQPTEEQVRELNDRVVEHYKYYYKAKSRCAKQDVLAMLSPTWMSSLEEAFLWIGGWRPSMAFHLLYSKSGLQFEARLNELIQGLRTHDLGDLSASQLAHLDEMQRRTILEEREITDLMARHQETVGDASMVELSHVVSEMIRANEAGEVDENKEIEDKVESTLVPKEEGLEKILLKADELRLRTLKAIVNVLAPKQAIHFLIAAVELHLRLHEWGKKMDARKCNPWFW 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2895 275 PANTHER - 20 269 - -
Ssu5g2895 275 PANTHER OS01G0159000 PROTEIN 20 269 - -
Ssu5g2895 275 Pfam Seed dormancy control 38 114 IPR025422 GO:0006351|GO:0043565
Ssu5g2895 275 ProSiteProfiles DOG1 domain profile. 21 268 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2895 Ssu-Chr5 75504938 75505765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2895 18 258 bZIP Transcription Factor Family AT5G06960 24.896 1.01e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2895 - - gmx:100784399 477.633