Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2868 atgacgTTTAATAGGAACGAAACAACAGAAATAATATGCTATTCAGCCACCATGATAACAACGGACGGGATATGGCAAAATGATAACCCTTTGCACtattctctccctctcttcatCTTGCAACTAATGTTAGTTGTGATTACCACCCGTTTATTTGTCTTCATACTCAAGCCCATTCGCCAGCCTCGTGTTATTTCTGAAATGTTGGGAGGCATATTATTGGGTCCTTCGGTGCTTGggaaaaacaaaacattttctgATGCAGTTTTTCCTCAAAGAAGTGTGATATTGATTGAAACAATGTCAAACGTTGGTAtcctttattttatgtttttggtgGGAGTGGGGATGGACGCATCAGCAATAAGACGCATAGGTAGAAAAGCAGTGGCCATAGGAGTTGTTGGCATGATCTTGCCTTTCGCATTTGGAACTTTcttcgcttttttttttatcaaactcaGCGAAGAAGATAGCAGAAGTAGCGCTTACGTCCTATTCCTTGGCGTTGTTCTCTCTGTGGCAGCATTTCCCGTTCTTGCCAGAATCCTTGCAGAGCTCAAACTCATCAACACAGAGATAGGAAGGGTTGCTCTTTCATCTGCAATCGTTAATGACGTGCTTTCTTGGGTGCTCTTGGCTATATCCATTACTATGGTAGAGAATCAGAaaccttctttttctctcttgttgATTTTCTTGTCAAGTGCAGCGTTTGTCGCTTTTAATGTTTTTGTCGTGAGACCTGTGATCTTGTGGATAATAAGGAAAACCCCGGAAGGTGAAGCATTCAGTGATTTCTATATTTGCATGATATTATCGGGTGTCATGATATCAGGTTTGGTCACAGATGCTATTGGAACCCATGCTGTTTTTGGAGCTTTTGTGTTTGGTTTGACAATCCCAAATGGACCACTCGGACTCACTCTTGTGGAAAGGCTCGAGGACTTCATGTCATTACTTTTGCTCCCTCTATTTTTCGCCACTAGTGGGCTAAAGACTGATCTAGGACTCCTCAAAGGGTTCTACACATGGGCAATTTTGATCATTCTTGTTGCTTTATCTTTCATTGGCAAAATCGTTGGAACTATAGCCGTTGCGGTCTATTATCAAATGTCCGTTCGTGAAGGAGCAGTTGTTGGCTTGCTCATGAACACAAAAGGCATTATTGAAGTTATCGTGCTTAACATTGGCAAGGATCAGCAGGTTTTGACCGAAGAATCATTTGCGTCCATGGTGATTATAACCATACTAATGACTGGAGTAATTGTGCCCGGGATATCAGCTATATACAAACCATCAAGGGGGGTCATATCTTATAAAAGAAGAACCATTCAGATGTCACACAGAGAATCAGAGTTCAGAGTCCTAGTGTGCATCCACACCCCACGGAACGTGCCAACAATGATTAACCTCCTCGACGCCTCTAACCCAACAAAGAAGTCCCCAATATGCATTTATGTGCTCCATCTGACCGAACTCACTGGCCATGCATCTGCATTACTCATTGTTCATAATCAAAACGCCAAGAAACCAGATCAAACTGCCTACAATAGGACTCAAGCTCAATCTGACCACATTATCAATGCCTTTGAAAACTACGAGCAACACGCTTCTCACGTCTCGGTGCAACCCTTGACAGCAATCTCCTCTTACTCCACTATGCATGAGGACGTATGCAACGTGGCTCAAGAAAAGCGTGTTGCCTTCATAATCATTCCTTTCCACAAACAGCAAACGGTTGATGGTGAAATGGAGGCCATGAACACGTCATTTCGCACCGTGAACCGCAATGTTCTAGCCCAAGCACCTTGCTCGGTTGGGATTCTAGTGGATAGAGGCTTAACTGTGTCCAACCATTTGGCTCCAGACCAAAGGTCTCACCATGTGGCAGTGTTGTTTTTTGGAGGGCCTGATGATAGAGAAGCATTGAGCTATGCATTGAGGATGTCAGAACATCCAGGGATAACCCTCACCGTGATGCGTTTTGTTCCTGGGGAAGAAATGATGCATCACAATGGCCACCCTGATGAACCAAGGATACTAGCAGTGCAAACGGATATGGACACTCAGAAGCAACTTGATGAGAAGCTTATACAGTGGTTTAGAACGAGTCATGTGGCCAATGACTCCATTGTGTATGTTGAGAAAATGGTCAACAATGGGGAGCAAACAGTGGCAGCAATAAGGACAATGGATGATATTCATGACCTTTTCATAATTGGGAGAGACCATGGAATGATATCACCGCTCACAGCAGGACTCACTGATTGGAGTGAGTGCCCGGAGTTAGGAGTAATTGGGGACTTGTTAGCTTCATCAGATTTTGCAGCCACTGCTTCAGTGTTGAtagttcaacaatatgttgggGAAGGAATAGAGGGAGATGGGTTGGGAACACCAGGACCAGACAACACGGTGATGATGACAAATGAAGAATATGTTAATCAAACTAATAACCATCATTCAACAGCACCAAGGGGACACAGTTTGCTCAATGGAGAAGAACGTTTGTGA 2517 0.4164 MTFNRNETTEIICYSATMITTDGIWQNDNPLHYSLPLFILQLMLVVITTRLFVFILKPIRQPRVISEMLGGILLGPSVLGKNKTFSDAVFPQRSVILIETMSNVGILYFMFLVGVGMDASAIRRIGRKAVAIGVVGMILPFAFGTFFAFFFIKLSEEDSRSSAYVLFLGVVLSVAAFPVLARILAELKLINTEIGRVALSSAIVNDVLSWVLLAISITMVENQKPSFSLLLIFLSSAAFVAFNVFVVRPVILWIIRKTPEGEAFSDFYICMILSGVMISGLVTDAIGTHAVFGAFVFGLTIPNGPLGLTLVERLEDFMSLLLLPLFFATSGLKTDLGLLKGFYTWAILIILVALSFIGKIVGTIAVAVYYQMSVREGAVVGLLMNTKGIIEVIVLNIGKDQQVLTEESFASMVIITILMTGVIVPGISAIYKPSRGVISYKRRTIQMSHRESEFRVLVCIHTPRNVPTMINLLDASNPTKKSPICIYVLHLTELTGHASALLIVHNQNAKKPDQTAYNRTQAQSDHIINAFENYEQHASHVSVQPLTAISSYSTMHEDVCNVAQEKRVAFIIIPFHKQQTVDGEMEAMNTSFRTVNRNVLAQAPCSVGILVDRGLTVSNHLAPDQRSHHVAVLFFGGPDDREALSYALRMSEHPGITLTVMRFVPGEEMMHHNGHPDEPRILAVQTDMDTQKQLDEKLIQWFRTSHVANDSIVYVEKMVNNGEQTVAAIRTMDDIHDLFIIGRDHGMISPLTAGLTDWSECPELGVIGDLLASSDFAATASVLIVQQYVGEGIEGDGLGTPGPDNTVMMTNEEYVNQTNNHHSTAPRGHSLLNGEERL 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2868 838 PANTHER CATION/H+ EXCHANGER 3 7 805 - -
Ssu5g2868 838 Gene3D - 37 435 IPR038770 -
Ssu5g2868 838 Gene3D - 481 759 - -
Ssu5g2868 838 MobiDBLite consensus disorder prediction 818 838 - -
Ssu5g2868 838 Pfam Sodium/hydrogen exchanger family 45 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu5g2868 838 PANTHER CATION/H + ANTIPORTER 7 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2868 Ssu-Chr5 75058566 75062486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2868 11 801 Antiporter Super Family AT2G13620 63.556 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2868 - - gmx:100779048 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2868 5 75058566 75062486 Ssu5g2868 5 75058566 75062486 ECH