Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2772 ATGTTGGCCTTTGTCGGTACTGAAGAATCTGAATACCGCATTGAACGGCCCAATATCAAAGCCATAATGCTGGATATGTTGGCTGGCTCAATGGATACTTCTGCTACAGCAATTGAGTGGACAATTTCGGAGCTCCTGAAGAATCCAAGGGTGATGAAGAAAGTCCAAATGGAGTTGGAAACTGTGGTGGGTATGAAGAGTAAGGTGGAGGAATCAGACTTGGACAAGTTGGAGTATTTGGACATGGTTATAAAGGAAAGCATGAGGATCCACCCAGTGGGACCGTTGCTAATACCTCACCAGTCCATTGAAGATTGCATGGTTGGAGATTTTTTCATACCTAAAAAATCAAGGGTCATAGTGAATGCATGGACTATTATGCGAGACCCAAGAGCTTGGGATGATGCGGAGAAGTTCTGGCCAGAGAGATTTGAGGGAAGCAGCATAGATGTAAGAGGGCGTGACTTCCAGCTGATACCGTTTGGGTCTGGCCGAAGGGGTTGTCCGGGAATGCAATTGGGTCTAACTGTGGTTCGTTTAGCAGTGGCACAGCTTGTGCATTGTTTTGATTGGAAGCTACCAAATAACATGTTGCCAACCGAGTTGGACATGACAGAGGAGTTCGGCCTCGCAATGCCCAGGGCCAATCATCTCCTTGCCATTCCTACGTATCGGCTTTCCAATGAAAGGTATTAG 696 0.467 MLAFVGTEESEYRIERPNIKAIMLDMLAGSMDTSATAIEWTISELLKNPRVMKKVQMELETVVGMKSKVEESDLDKLEYLDMVIKESMRIHPVGPLLIPHQSIEDCMVGDFFIPKKSRVIVNAWTIMRDPRAWDDAEKFWPERFEGSSIDVRGRDFQLIPFGSGRRGCPGMQLGLTVVRLAVAQLVHCFDWKLPNNMLPTELDMTEEFGLAMPRANHLLAIPTYRLSNERY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2772 231 PRINTS E-class P450 group I signature 158 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS E-class P450 group I signature 168 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS P450 superfamily signature 159 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 161 170 IPR017972 GO:0005506|GO:0016705
Ssu5g2772 231 Gene3D Cytochrome P450 2 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PANTHER CYTOCHROME P450 93A3-LIKE 1 227 - -
Ssu5g2772 231 Pfam Cytochrome P450 13 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2772 231 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 227 - -
Ssu5g2772 231 SUPERFAMILY Cytochrome P450 11 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2772 Ssu-Chr5 73473112 73498825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2772 9 226 Monolignol Biosynthesis Gene Families AT4G36220 52.511 3.01e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2772 K20562 - gmx:100809526 424.476