Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2691 ATGGCCCAGTCAGCAGTAGGAACACAAGAGTGGGTTGCAGAGGAGTTGGAGCCAGAGGCCATAGAACTAAAAACACCTGTTTTGCTGATTGAGGAAGACATCGCAGGTGTCATCATGGAAATCATATTGAAGGGATATATAATTGCCATCAACCAGAAGCAGAAACACTGCAATCCCACACTGGAACAATGCCAGCAACACCAACTAGATCCAACAATGGAAATGGAAGCCAAATGGGGGAGTATCCCAACAGAGACTGCAGCTCTGGCGCAGAAGAATTCTGAGGCTGCTAGAGCATTAGCAGTGCAATCAGACATTTTGGAGAAGGAACTTGGTGAAATTCAACAGGTTTTACTAGCAATGCAGGAACAACAGCGAAAACAACTTGATCTGATTCTTGCAATTGGGAAGGCTGGTGAGAAGGGATTACTCGAGAGTCAAGACAAACTAAGGTCGGAGAATTTGTTGAACTCTGTCCAGTTTTGTGGTAAAAGTTCAGGAACGTTAGGTTCAATTCCTCCTAGCTGTCACAACAAGTGCAATGATTGTCACCCATGCATGGCAGTTCAAGTGCCAACTTTGCCTAGCCATGACTCTAACCCTCCAGATCTTACCAAAACAGCTGCCACGGCAAGTTTTCTTGACCCTTCTCTCCAAGGTAACAGATCTAGTCGTGGCAATTGTACTAGTGGTAGATATGGTCACGACAATGGCAAATCTGGTCAGGACGATCACAAATCTAGTTGTGACAGTTGCACTAGTGGTTGTGGTGCTCGAGGCTGCTTTGCTTATGAAGGTGAGGAGGTTCAAGACACGCTTCtccttttttccccttctttgaCGAGGAGGCTCAAGATGCACTTCAACGAGGAGTTGTCGAAGCCGCCAAAGTGCAAAGGCGGCACAAACGGCATAGAGGCATGGCCAAAAGTCTAG 936 0.4573 MAQSAVGTQEWVAEELEPEAIELKTPVLLIEEDIAGVIMEIILKGYIIAINQKQKHCNPTLEQCQQHQLDPTMEMEAKWGSIPTETAALAQKNSEAARALAVQSDILEKELGEIQQVLLAMQEQQRKQLDLILAIGKAGEKGLLESQDKLRSENLLNSVQFCGKSSGTLGSIPPSCHNKCNDCHPCMAVQVPTLPSHDSNPPDLTKTAATASFLDPSLQGNRSSRGNCTSGRYGHDNGKSGQDDHKSSCDSCTSGCGARGCFAYEGEEVQDTLLLFSPSLTRRLKMHFNEELSKPPKCKGGTNGIEAWPKV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2691 311 MobiDBLite consensus disorder prediction 197 236 - -
Ssu5g2691 311 MobiDBLite consensus disorder prediction 197 247 - -
Ssu5g2691 311 Pfam Epidermal patterning factor proteins 169 196 - -
Ssu5g2691 311 Coils Coil 107 127 - -
Ssu5g2691 311 PANTHER TRANSMEMBRANE PROTEIN 84 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2691 Ssu-Chr5 72316201 72326732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2691 84 140 Eukaryotic Initiation Factors Gene Family AT5G65250 75.439 8.44e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2691 - - gmx:100306366 110.153