Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2690 ATGCTGGTGGCTGGGGTTTTGATCGGCGCGTGGGATTCGGAGACGGCAGTGGAGGCGCGTGTGTGTGGAGACGGGGAAGGGCGGGTTGGAGGTGAACTTGCTCGAGAGGATGAGAAATTGGAGGAGGATTTGAAGAGTTCCGCGACGGTTGTTAGGGTTTTGTCGAGACAGCTCGAGAAATTGGGGGTTAGGTTTAGGGTTACGAGGAAGGCGTTGAAGGACCCATAG 228 0.5614 MLVAGVLIGAWDSETAVEARVCGDGEGRVGGELAREDEKLEEDLKSSATVVRVLSRQLEKLGVRFRVTRKALKDP 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2690 75 PANTHER TRANSMEMBRANE PROTEIN 1 75 - -
Ssu5g2690 75 PANTHER TRANSMEMBRANE PROTEIN 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2690 Ssu-Chr5 72314508 72314735 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2690 2 75 Eukaryotic Initiation Factors Gene Family AT5G65250 55.405 2.83e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2690 - - gmx:100790782 87.0409