Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu5g2660 | ATGTCGAAACCCTGGGGCAACATCGGAGCCTGGGCCGCGGATTCCGAGCTGGCCGAGGCCGAGGAGCGCGAGGCCCAGGCCGCGGCCGCGGCCGCCGAGGCCCAAAACTTCCCCAGCCTCAAGGAGGCCGCGAACGCCAAGCccaagaagaagaaaggcatGACGGTTACGCTTTCCGAGTTCAACCGAACCGGCGAGAACCAGGGCCTAACGCGCGACGAGATGCTCGCGCTTCCTACCGGTCCCAAGGAACGTTCCGCCGAGGAAATGCAGTTCAACCGCCTCGGCGGTGGTTTCTCCTCCTTCGACCGCTCCGGCCCCCGCTCGCGCGACCGCGACGGCGGCAACGGGGACGGTTCCTGGGGCGGCGGAGGGAGAAGATCCTACGGCGGAGGCTTCGACGACGAACGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCGTCGCGGGCCGACGAGGTGGACAATTGGGCGTCGGTGAAGAAAACCCTCCCCTCCTTCGATTCCGGCCGCCAGAATCGCTacggcggcggcggcggtggCGGTTTTGGCGGCGCGTCGAGGGCCGATGGGGTGGACAATTGGGCGGTTGGTAAGAAGCCTGTTACTCCCGTTAGATCTTCTAATTTCGGTTCCGGTTTTCGCGATTCCGGCGTGGAGCCTGATCGCTGGACGAGAGGCGGTCCGCTGCGCGAGATTGAGCGGATGGAGCGGCCGAGGCTGGTGTTGGATCCGCTGAGAGGGGACGGTTCGGTGAACGAGGCTCCGGCGAGGGCGAATAAGGCGAATCCATTCGGCACGGCGCGGCCGAGGGAGGAGGTGTTGGCTGAGAAGGGGTTGGAttggaagaagatggattcggAGATTGAGGCGAAGAAGACGAGCCGGCCCACAAGTGCACATTCTAGCAGGCCTTCCAGTGCTCAGTCGAATCGCTCCGAGGGTCCCGGGTTGCAGGGGATCGATGCTGTGGTGAAATCGAGGCCCAAGGTGAACCCCTTTGGGGATGCAAAGCCCAGGGAGGTTCTGCTGGGCGAGCGAGGCATGGATTGGCGGAAGATTGATCTTGAGTTGGAGCATCGCGCTGTTGAgagGCCTGAGacaatggaagaaaaattattaaaagaagaaattgataatttgaaGAAGGAACTTGAGAAAGAGTCTACAATAAATTCAAACAAGGAATCTGCGGATGAGGCTGGTGGAGACCAAAGCAGTACACATGCCATATTACGACAGAAAGAGAAGGAGCTGGAATTTCTTATCCGTGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCCGTTGAAAGGCCAGGTTCATCGGCAGGAAAGTCTACTGGTTTTTCTGATAGGCCACCTTCTAGATCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTACAGAAAGACCTCGATCTCGTGGTACAGGAGATATGTGGATGCGTCCTAGTGATGACAGAAGACAGTTTCAAGGTAGCAGGGAAAGGGGATGGTTTTCTGGTAGCAGAGACTTGAATAGGTCAAGGTCAAGAGAGAGATGGTGA | 1557 | 0.5485 | MSKPWGNIGAWAADSELAEAEEREAQAAAAAAEAQNFPSLKEAANAKPKKKKGMTVTLSEFNRTGENQGLTRDEMLALPTGPKERSAEEMQFNRLGGGFSSFDRSGPRSRDRDGGNGDGSWGGGGRRSYGGGFDDERRGPNPRVSELDQPSRADEVDNWASVKKTLPSFDSGRQNRYGGGGGGGFGGASRADGVDNWAVGKKPVTPVRSSNFGSGFRDSGVEPDRWTRGGPLREIERMERPRLVLDPLRGDGSVNEAPARANKANPFGTARPREEVLAEKGLDWKKMDSEIEAKKTSRPTSAHSSRPSSAQSNRSEGPGLQGIDAVVKSRPKVNPFGDAKPREVLLGERGMDWRKIDLELEHRAVERPETMEEKLLKEEIDNLKKELEKESTINSNKESADEAGGDQSSTHAILRQKEKELEFLIRDLDDKVRFGQKAVERPGSSAGKSTGFSDRPPSRSGSFEDSRSVDFTERPRSRGTGDMWMRPSDDRRQFQGSRERGWFSGSRDLNRSRSRERW | 518 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 300 | 318 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 466 | 497 | - | - | |
Ssu5g2660 | 518 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 | 1 | 518 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 273 | 299 | - | - | |
Ssu5g2660 | 518 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 518 | IPR010433 | GO:0003743 | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 436 | 518 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 387 | 414 | - | - | |
Ssu5g2660 | 518 | Coils | Coil | 373 | 400 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 446 | 465 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 221 | 246 | - | - | |
Ssu5g2660 | 518 | Coils | Coil | 15 | 35 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 397 | 411 | - | - | |
Ssu5g2660 | 518 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 501 | IPR010433 | GO:0003743 | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 504 | 518 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 16 | 339 | - | - | |
Ssu5g2660 | 518 | MobiDBLite | consensus disorder prediction | 130 | 159 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu5g2660 | Ssu-Chr5 | 71547005 | 71554940 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu5g2660 | 1 | 518 | Eukaryotic Initiation Factors Gene Family | AT3G26400 | 55.456 | 2.60e-152 | 444 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu5g2660 | - | - | gmx:100784238 | 791.956 |