Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2631 ATGTTAGAGAGTGGTGGTGGTGAATGTGATTCTGAGGTGAGTTTGGAGACTGTGAATTCCACACTTCGAAGCTCCATGAGCAGTGGAAGCCTTTGCAGCACGAGTTTCAGTCGCCTTTCCTTCGATCTCCTCCCGGCCTCGCCGGAGAGTCTCTCCGTCAAGCCTCACCGCTCGTCCGACTTCGCCTACTCCGCCATCCGCTCCGCCACGTTCCGCCGCAAGGCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAACGCCAACAACAACCAATTCGACGACGAAGAAGAAGACGCGTCCTGTTTGTACGCCATGAAGGTGGTGGACAAAGACGCAGTGGCACTGAAGAAGAAGTCGCAGAGAGCGGAAATGGAGAGAAAAATCCTCAAGATGCTCGACCACCCTTTCCTCCCTACGCTCTACGCCGAGTTCGAAGCCTCTCATTTCTCGTGCATCGTCATGGAGTTTTGTTCCGGTGGAGACTTGCACACCATGCGCTTCAAGCACCCTCGCAACCGTTTCCCTCTCCCCTCCgctagATTTTATGCCGCGGAGGTGCTGGTGGCGTTGGAATACCTTCACATGCTGGGAATCATCTACAGAGATTTAAAGCCTGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTCTCTGATTTCGATCTTTCTCTTTGCTCAGATGCAATCCCAGCCGTTGAATCCTCAGATTCCTTACACGATCCATCTCCGACTGCATTGCCTTACACTCGCTCGCATTCTTTTATCAGTCCATTCTCGTGCTTCTCGAACCGGGTGTTCCGGTCTCGCGATATCCGAGGCATTGAACCGAACCGGTTATTCGTTGCCGAACCGGTTTCGGCCCGGTCCTGCTCCTTCGTCGGAACGCACGAGTACGTCTCGCCGGAGGTTGCCGCCGGAGGGTCGCACGGCAACGCCGTGGACTGGTGGTCGTTTGGAGTATTTATCTACGAGCTCATATACGGTCGCACGCCGTATGCGGGCGCGTCGAAGGAGGCTACGCTGCGGAACATCGTAAAGAAACCCCTGGCGTTTCCCACGGCCACGCCCGCGAGCGGGCTTGAACTTCACGCGCGGGATTTGATATCCGGCTTGCTGAACAAGGATCCGGCGCGGCGGCTCGGCTCGAAGCGCGGCGCCGCTGACGTCAAGAAGCACCCGTTCTTCAAAGGGCTGAACCTGGCGCTGATTCGCATGCAGACGCCGCCTGAAGTGCCTGGCTCGAGAAGGACCAAAACGACGTCGCTGTACCCTGTGAAGGGTAACGGCAACGACAGTAGACAACAGACGACGGCGTCgtttgatttttacttttaa 1389 0.5652 MLESGGGECDSEVSLETVNSTLRSSMSSGSLCSTSFSRLSFDLLPASPESLSVKPHRSSDFAYSAIRSATFRRKAALTFRDFHLLRRIGAGDIGTVYLCRLRNANNNQFDDEEEDASCLYAMKVVDKDAVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHTMRFKHPRNRFPLPSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDSLHDPSPTALPYTRSHSFISPFSCFSNRVFRSRDIRGIEPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWSFGVFIYELIYGRTPYAGASKEATLRNIVKKPLAFPTATPASGLELHARDLISGLLNKDPARRLGSKRGAADVKKHPFFKGLNLALIRMQTPPEVPGSRRTKTTSLYPVKGNGNDSRQQTTASFDFYF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2631 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Ssu5g2631 462 SUPERFAMILY Protein kinase-like (PK-like) 62 431 IPR011009 -
Ssu5g2631 462 ProSiteProfiles Protein kinase domain profile. 82 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g2631 462 Gene3D Transferase(Phosphotransferase) domain 1 306 431 - -
Ssu5g2631 462 MobiDBLite consensus disorder prediction 430 462 - -
Ssu5g2631 462 Gene3D Phosphorylase Kinase; domain 1 80 173 - -
Ssu5g2631 462 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 7 462 - -
Ssu5g2631 462 Gene3D Transferase(Phosphotransferase) domain 1 174 241 - -
Ssu5g2631 462 PANTHER FLIPPASE KINASE 1-RELATED 7 462 - -
Ssu5g2631 462 MobiDBLite consensus disorder prediction 426 462 - -
Ssu5g2631 462 Pfam Protein kinase domain 82 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g2631 462 Pfam Protein kinase domain 307 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g2631 462 SMART serkin_6 82 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2631 Ssu-Chr5 71198980 71200463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2631 8 461 AGC Kinase Gene Family AT2G34650 65.142 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ssu5g2631 Pkinase 4.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2631 - - vun:114177159 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2631 5 71198980 71200463 Ssu5g2631 5 71198980 71200463 ECH