Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2615 ATGCTTGGTGGGGCTTTGCATTCCAAAACCCAAATGGAAAACATGCATTGGTCACCTTTAGTGGTACTGTGTTTCTTGGGAATGCTTCTAATACCCTCCTTGTGTCAACGTGATGCTACTACAGCTGTGTACATTGTTACTCTGAGACAAGCTCCTACTTCTCACTCTCATCATGAGTTGATCACAGTGGGTAATGGTGCATCTGGGAGAAGAAGAACTAGACTTCACAAACCAAGACATCAGAATGTTACAAAGACAGATAGGAGACATGGTTCATACTTTGCCCGAGTTCATGATTCGTTGTTGAATAGGGTGTTTAGGGGGGAGAAATATCTGAAGCTTTATAGCTATCATTACTTGATTAATGGATTTGCTGTGCTGGTTACCCAACAGCAGGCAGATAAACTATCAAGGAGAAGAGAAGTGTCCAATGTGGCTTTGGATTTTTCTGTGAGAACTGCAACCACCCACACTCCACAGTTTTTGGGTCTGCCACAGGGAGCTTGGTTGCAAGCAGGTGGGTTTGAAACTGCTGGAGAAGGAATCACTATTGGGTTTGTTGACACTGGCATTGATCCTACACACCCTAGTTTTGCTGATGATAAATCTGAACATCCTTTCCCTGTTCCTGCTCATTTCTCTGGCATCTGTGAGGTTACTCCGGATTTTCCGTCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCAGACATTTTGCAGCATCTGCTATAACCAGAGGAATATTTAATTCATCTCAGGACTATGCTTCTCCCTTTGATGGCGATGGCCACGGCACACACACAGCTTCTGTTGCAGCCGGAAACCATGGAATTCCAGTGGTCGTTGCTGGGCAATTTTTCGGAAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCCATTTACAAGGCACTATACAAGAGATTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATATGCTTGTCAATCACTCCTAATAGGCGTCCTTCTGGTATTGCAACTTTCTTCAATCCAATAGATATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCGGGCAATACTGGACCATCACCTATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCCACCTCCCATGATCGTGTTTATAGCAACTCCCTATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTGACACATATGAGAACACAATGTTTAAACTGATTCATGCACGACATGCTTTGAACAAAAACACAACAGTTGCTGATGATATGTATTTTGGTGAGTGTCAAGATGCAAGTAAATTCAATCAGGATTTGGTCCAGGGCAACATCCTGATCTGTATCTATTCAGTCCGATTTGTGCTTGGGCTCTCCACCATCAAACAGGCCTTAGAAACAGCCATGAACCTTAGTGCGGTTGGTGTTGTTTTCTCCATGGATCCTTTTGTGACTGATTTTCAGCTTAACCCAGTTCCAATGAAAATGCCTGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTACTGCAATACTACAATTCTTCACTGGAAATAGATGgggattcaaataaaattgttaaatttgggGCAATTGCTAGCATTGGTGGTGGATTAAAAGCGAACTACAATAATGAGGCCCCAAAGGTTGTGTACTACTCTGCCAGAGGACCAGATCCAGAGGATGGTCTTCCTCATGAAGCTGACATTATGAAACCTAATTTGGTAGCTCCTGGAAATTTTATATGGGCTGCTTGGAGTTCTCTTGCCACTGATTCTGTTGAGTTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAATTAAGCAAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCTGCACTTTCCACCACGGCTTCTCTGTATGACAACAATGGGAGGCCAATAATGGCTCAGCGATCATATCCCTCCCTAGACCTTAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAAATCCTGGATTGCTTTTTGATTCTAGTTATGATCATTATATGTCATTCCTATGTGGTATCAATGGTTCAACTCCTACGGTGCTAAACTACACCGGTCAAAATTGCTGGAGTTATAATTCTACAGTATATGGCCCTGATCTGAATTTGCCTTCAATCACAATAGCAATGTTGAACCAATCTAGAGTAGTACAGAGAACAATCCAAAACATTGCTGGAAATGAAACTTACAACGTTGGTTGGAGTGCTCCATATGGGACTTCTATGAAAGTGTCTCCTAATCACTTCTCTTTTGCTAGTGGAGAGAGACAAGTCTTGTCTGTGATCTTTAATGCAACAAGCAACAGCTCTGTTGCCAGCTTTGGGAGAATTGGGCTGTATGGTAATCAAGGTCATGTTGTCAACATTCCTGTGTCAGTCATAGTTAAAAATCTCGTAACAAGCTAA 2550 0.4271 MLGGALHSKTQMENMHWSPLVVLCFLGMLLIPSLCQRDATTAVYIVTLRQAPTSHSHHELITVGNGASGRRRTRLHKPRHQNVTKTDRRHGSYFARVHDSLLNRVFRGEKYLKLYSYHYLINGFAVLVTQQQADKLSRRREVSNVALDFSVRTATTHTPQFLGLPQGAWLQAGGFETAGEGITIGFVDTGIDPTHPSFADDKSEHPFPVPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVVVAGQFFGNASGMAPRSHIAIYKALYKRFGGFAADVVAAIDQAAQDGVDIICLSITPNRRPSGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGATSHDRVYSNSLFLGNNVTIPGVGLAPDTYENTMFKLIHARHALNKNTTVADDMYFGECQDASKFNQDLVQGNILICIYSVRFVLGLSTIKQALETAMNLSAVGVVFSMDPFVTDFQLNPVPMKMPGIIIPSANDSKILLQYYNSSLEIDGDSNKIVKFGAIASIGGGLKANYNNEAPKVVYYSARGPDPEDGLPHEADIMKPNLVAPGNFIWAAWSSLATDSVEFLGENFAMMSGTSMAAPHVAGLAALIKQKFPNFSPAAIGSALSTTASLYDNNGRPIMAQRSYPSLDLNLSPATPFDMGSGFVNATAALNPGLLFDSSYDHYMSFLCGINGSTPTVLNYTGQNCWSYNSTVYGPDLNLPSITIAMLNQSRVVQRTIQNIAGNETYNVGWSAPYGTSMKVSPNHFSFASGERQVLSVIFNATSNSSVASFGRIGLYGNQGHVVNIPVSVIVKNLVTS 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2615 849 Pfam Peptidase inhibitor I9 43 154 IPR010259 -
Ssu5g2615 849 ProSiteProfiles Serine proteases, subtilase domain profile. 158 702 - -
Ssu5g2615 849 CDD Peptidases_S8_3 154 661 IPR034197 -
Ssu5g2615 849 SUPERFAMILY Subtilisin-like 154 706 IPR036852 GO:0004252|GO:0006508
Ssu5g2615 849 ProSitePatterns Serine proteases, subtilase family, serine active site. 625 635 IPR023828 -
Ssu5g2615 849 PRINTS Subtilisin serine protease family (S8) signature 179 198 IPR015500 -
Ssu5g2615 849 PRINTS Subtilisin serine protease family (S8) signature 259 272 IPR015500 -
Ssu5g2615 849 PRINTS Subtilisin serine protease family (S8) signature 624 640 IPR015500 -
Ssu5g2615 849 Pfam Fibronectin type-III domain 748 841 IPR041469 -
Ssu5g2615 849 CDD PA_subtilisin_like 403 535 - -
Ssu5g2615 849 MobiDBLite consensus disorder prediction 66 86 - -
Ssu5g2615 849 Pfam Subtilase family 179 664 IPR000209 GO:0006508|GO:0008236
Ssu5g2615 849 Gene3D - 394 562 - -
Ssu5g2615 849 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 33 152 IPR037045 -
Ssu5g2615 849 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 184 195 IPR023827 -
Ssu5g2615 849 Gene3D - 719 843 - -
Ssu5g2615 849 Gene3D Peptidase S8/S53 domain 181 715 IPR036852 GO:0004252|GO:0006508
Ssu5g2615 849 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 844 IPR045051 -
Ssu5g2615 849 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 27 844 - -
Ssu5g2615 849 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2615 Ssu-Chr5 70927385 70938535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2615 38 844 Subtilisin-like Serine Gene Family AT4G20430 68.054 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2615 - - gmx:100814065 1531.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2615 5 70927385 70938535 Ssu5g2615 5 70927385 70938535 ECH