Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2608 atggaaactaaaattgaagTTGCTGAAGATCAGTATGAGAAAAAAACAACAACGGAGTTGAAGAACACtgaaaaaatgaaggaattCATTGATGATTGGAATAGTTCCTCTACTACTTCCAATTTGGTATCTAAAATTGTAGAGAAACTAAAGGAACTTGTCACTAATATGTTCAAGAAGGTATATCTGGTGGATCCAAATCTAGTAGATCTAGTACAATGGCGTTGCCATCACCAGAAGACAAGCCACTGCAGTGCAATGCATGTGGATCAAGATACAGGAAATGGGGAAGCCAGCCTTGAGGACTGTCTTCCCAACCATTTTCAACCAGAGCATCCTGATGAAGTTAAAAATCTGAAGGGTAGAAAAATTTTCCTCATTGCAAGCTATGTTACACGTGGGAAAGATGCACATTCATGGAGTCCTAAGATCCCTTCAAGGAAACGTTCACGGGTGGTGCACAAGAAGATAACACCAATGAAGAGGTTTCAAAAACAACTTATCGATATGTGGAAAAATTACGGGAACCCAAATGAGTCATCCCCAGAAGAGGTCTTATTGTTCAATAACGTAAATAACTTCATACCTAGTAATGAAATAGGCCTTGGAGGTGTTCTTCTTAAACCAGATGATACTTCTGCATAG 645 0.3736 METKIEVAEDQYEKKTTTELKNTEKMKEFIDDWNSSSTTSNLVSKIVEKLKELVTNMFKKVYLVDPNLVDLVQWRCHHQKTSHCSAMHVDQDTGNGEASLEDCLPNHFQPEHPDEVKNLKGRKIFLIASYVTRGKDAHSWSPKIPSRKRSRVVHKKITPMKRFQKQLIDMWKNYGNPNESSPEEVLLFNNVNNFIPSNEIGLGGVLLKPDDTSA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2608 214 PANTHER GATA ZINC FINGER PROTEIN 97 214 - -
Ssu5g2608 214 PANTHER OSJNBB0038F03.10 PROTEIN 97 214 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2608 Ssu-Chr5 70730584 70733098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2608 - - ccaj:109790008 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0044 1 1913057 1917191 Ssu5g2608 5 70730584 70733098 PCT