Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2587 ATGGAGAAGTACGAGGCAGTGGAGGAGAAAATAGGGGTTGGGAGATTTTCTGTGGTAAGGCTTATGCGTCACAAAGAGACTAAAGACCTCGTTGCCGTCAAATACCTCCCACGGGGCCACAAGATTAATGATAGGGTGGCAAGGGAAATCATAAACCATAGATCACTTCGCCATCCGAATATTGTTCGGTTCAAGGAGGTGGCTTTGACTACAACACATCTTGCAATAGTTATGGAGTATGCAGCGGGTGGAGAGCTGTTTGAACGAGTTTGCAGAGGAGCAATACAAGAAGACGAGGCTCGATATTTCTTCCAGCAGTTGATTTCAGGAGTTAGTTATTTTCATGACATGGCAATATGTCATCGAGACTTGAAGTTGGAGAATACCATATTGGATGGCAGCCCTGATCATTGtcttaaaatttgtgatttcggCTATTCTAAGTCATGTCTACTTCATTCGAGGCCTAATTCAATGATTGGAACCCCAGCCTATATTGCACCAGAAATCCTTTCCGAGAAAGATTACGACGGAAAGTTGGCAGATGTATGGTCCTGTGGTGTAATACTTTATACAATGTTGGTAGGAGCATTGCCGTTTGAGGACAAAGAGGATCGCCAAAATCTCCAGAAAACCATAAAACGAGTTATGGCTGTTCAATACAAGTTCCCCGACAAAGTTTGCATATCTCAAGACAGTAAAAATCTGATATCTCGCATTTTTGTGGCAAATCCAGCGATGAGAATCACCATGAAGGAAATCAAGTCCCATCCATGGTTTTTAAAGAACTTGCCTAAGGAATTGGGAGAAGGGGCTCAAGATGTCTACTACAACGAAGAAAATGCAAAATCTTCTCTTCAaagttttttggtttaa 876 0.4098 MEKYEAVEEKIGVGRFSVVRLMRHKETKDLVAVKYLPRGHKINDRVAREIINHRSLRHPNIVRFKEVALTTTHLAIVMEYAAGGELFERVCRGAIQEDEARYFFQQLISGVSYFHDMAICHRDLKLENTILDGSPDHCLKICDFGYSKSCLLHSRPNSMIGTPAYIAPEILSEKDYDGKLADVWSCGVILYTMLVGALPFEDKEDRQNLQKTIKRVMAVQYKFPDKVCISQDSKNLISRIFVANPAMRITMKEIKSHPWFLKNLPKELGEGAQDVYYNEENAKSSLQSFLV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2587 291 ProSiteProfiles Protein kinase domain profile. 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g2587 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Ssu5g2587 291 SUPERFAMILY Protein kinase-like (PK-like) 7 267 IPR011009 -
Ssu5g2587 291 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Ssu5g2587 291 SMART serkin_6 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g2587 291 PANTHER SERINE/THREONINE KINASE 2 288 - -
Ssu5g2587 291 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Ssu5g2587 291 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Ssu5g2587 291 Pfam Protein kinase domain 7 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g2587 291 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2587 Ssu-Chr5 70416003 70428648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2587 11 264 CBL-interacting serine-threonine protein kinases AT5G25110 41.132 3.73e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ssu5g2587 Pkinase 2.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2587 K14498 - gmx:100787825 486.108