Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2582 ATGGCAAATTCGAAGGGCTCATCGGGTGTCAGAAATTTTATGTATCCTGGAAAGCATGCTCTACTTCCTCCTAAAAGCCCGTTTCCTAGTGTTTCGCAAGCATATGCTGATTATGTTCCCAATCCCGCTGTTGGTTTAAAACCTGCTAACAGACCTAGAGAGGGAAACATACACCACCAACGTACTTCATCTGAGAGCCTTATTATAGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTCCGAAGAGGTGGCCATCGGCGTTCATCAAGTGATTCTTTTGCGTACATAGACACAGTTAATGCATCTAACATCAATTATGCTGATCAGGACGAgtataaatataagaatttgaTGTCTATTCCATCCTGGTCATCTCAAGACTTTGACCGCAGCAAAGATGCTCGTCATGTACCTGTTTATGCAGAAATGAACTCAGCAAAACAGAAAAATAGGTCATGGGACTCTTTTTCGAATGCCATGACAAATCCAGTTGGTGTTCCCTCTGGCAAAGACAGTGCTGCTTTTCAGAGTTCAGGATTGCCATGTGCACCACATGAAGCAGATGGGCTTCCACCAACTGCAATTGAAAAGCATGATTCAGTAGAATCTGGCTTACAGGATGCAAAATCATTTTCTGAAAAAAAGGACAATTCACATGCAAAGTCATCTGCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAACGATCACGGGTCCGGAAACTTCAATACATAGCCGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTCTCAGCCGAGCTCGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTATAGCACAAGAGCAGCTTATCAAGTATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGCTCACTGTATCAGCAGCAGCAACAGCCACAACAGCAACCATCTGGTAGTCATAGACGCACAAACAGCAGAGACCTCGAATCTCAGTTTGCAAACCTTTCTCTAAAACACAAGGACACCAATTCAGGGCAAGACCCTGCAACTGGAGCTCTCAGAATTTAG 1125 0.4329 MANSKGSSGVRNFMYPGKHALLPPKSPFPSVSQAYADYVPNPAVGLKPANRPREGNIHHQRTSSESLIIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNINYADQDEYKYKNLMSIPSWSSQDFDRSKDARHVPVYAEMNSAKQKNRSWDSFSNAMTNPVGVPSGKDSAAFQSSGLPCAPHEADGLPPTAIEKHDSVESGLQDAKSFSEKKDNSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESIAQEQLIKYLEQEVLEREIGRLRSLYQQQQQPQQQPSGSHRRTNSRDLESQFANLSLKHKDTNSGQDPATGALRI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2582 374 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Ssu5g2582 374 MobiDBLite consensus disorder prediction 46 68 - -
Ssu5g2582 374 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Ssu5g2582 374 Coils Coil 248 296 - -
Ssu5g2582 374 MobiDBLite consensus disorder prediction 325 374 - -
Ssu5g2582 374 Gene3D - 236 289 - -
Ssu5g2582 374 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 1 362 - -
Ssu5g2582 374 MobiDBLite consensus disorder prediction 171 244 - -
Ssu5g2582 374 MobiDBLite consensus disorder prediction 347 368 - -
Ssu5g2582 374 MobiDBLite consensus disorder prediction 325 340 - -
Ssu5g2582 374 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 362 IPR044797 -
Ssu5g2582 374 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Ssu5g2582 374 MobiDBLite consensus disorder prediction 198 242 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2582 20 307 bZIP Transcription Factor Family AT2G42380 30.233 1.80e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2582 - - gmx:100813098 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2582 5 70214606 70218570 Ssu5g2582 5 70214606 70218570 ECH