Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2569 ATGCTCTCTGTTGTCTTGTGGCCTTCATCAATAGTTAAGGTCTTAAAGACACTATATCTTATGGGGGTGACCATCCTTGTAGTCTTGCCAGCAGTTTTGGCATTTTTTGTCCTTTGTCTACATTTCATCACTAAAATTGTCAGACTCAGAAACCTGCATCTTCCTCCTGGAAGATTAGGGTGGCCTATTGTTGGAGAAACCTTTGAGTTTATGCGTACAGGTCTTGAGGGCAACGTGTTAAGGTTCATACAAGAGAGAATGGAGAAATATGACTCCGGGGTGTTCAAGACTTCACTGTTTGGAGATCCTATTATTGTGTTTTGCGGGCCAGCTGGGAACAAGTTCCTATTCAGCAACGAGAACAAGAATGTCCAAGTGTGGTGGCCTAGTTCGGTAAGGAAGCTGTTAAGGTTGTCCCTGGTTAATAAGGTTGGTGATGAGGCAAAGATGGTGAGAAGGTTGCTCATGAGCTTTCTTAATGCAGAAACACTCAGAAACTACTTGCCAAAAATGGATAGTATTGCTCAGCGCCATATAGACACATATTGGGAGGGAAAGGAGCAGGTATTTGTCTATCCCATAGTACAGCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGACCATATATCAAAGCTTTCgttaaaatttgatgaatttctGAAAGGGATCATTGGCTTCCCCCTCAACATTCCTGGAACAAGGTTTCATCGGGCAATGAAAGCTGCAGATGTaataaggaaagaaattaaaatgattctaaagaaaaggaaagtggATTTGGAGGAGAAGAGGGCATCACCTACTCAAGACCTTCTTTCACATATGCTTCTTACATCTGACCCCAGTGGAAGGTTTATAACCGAAATGGAGATTATTGATAAcatacttcttcttctttttgctgGTCATGATACTTCTAGATCAGTGTTATCATCGGTCATGAAGTGTCTTGGACAGTTGCCTCAAGTTTATGAACATGTGTTGAAAGAACAACTTGAAATTAGTCAAGGAAAAGAGGTAGGGCAGTTGTTGCAATGGGAAGATGttcagaaaatgaaatactcttGGAATGTTGCATCTGAAGTCATGAGGCTCTACCCACCTGTGAGTGGTGCTTACAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGGTGGAAGCTGCATTGGAACACTGGTTCATCGCACAAGGATCCAGCACTCTTCTCGAATCCCGAAACTTTTGATGCTTCAAGGTTTGAAGGGGCAGGGCCTACACCCTTTTCATATGTTCCATTTGGAGGTGGCCCCCGAATGTGTTTGGGGCAAGAATTTGCTAGACTAGAGATACTTGTGTTTATGCATAATATCGTGAAACGGTTCAAGTGGGATTTGGTGATTCCTGATGAGAAGTTTAAGTATGATCCCATGCTAGAACCGGTAAAAGGACTTGCAATTCGACTTCATCCTTCCCATTTCTAG 1497 0.3975 MLSVVLWPSSIVKVLKTLYLMGVTILVVLPAVLAFFVLCLHFITKIVRLRNLHLPPGRLGWPIVGETFEFMRTGLEGNVLRFIQERMEKYDSGVFKTSLFGDPIIVFCGPAGNKFLFSNENKNVQVWWPSSVRKLLRLSLVNKVGDEAKMVRRLLMSFLNAETLRNYLPKMDSIAQRHIDTYWEGKEQVFVYPIVQLYTFELACCLFLSIEDSDHISKLSLKFDEFLKGIIGFPLNIPGTRFHRAMKAADVIRKEIKMILKKRKVDLEEKRASPTQDLLSHMLLTSDPSGRFITEMEIIDNILLLLFAGHDTSRSVLSSVMKCLGQLPQVYEHVLKEQLEISQGKEVGQLLQWEDVQKMKYSWNVASEVMRLYPPVSGAYREAIKDFTYADYNIPKGWKLHWNTGSSHKDPALFSNPETFDASRFEGAGPTPFSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFKYDPMLEPVKGLAIRLHPSHF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2569 498 Pfam Cytochrome P450 55 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 SUPERFAMILY Cytochrome P450 48 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 Gene3D Cytochrome P450 43 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 34 486 - -
Ssu5g2569 498 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Ssu5g2569 498 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g2569 498 PANTHER CYTOCHROME P450 26 34 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2569 Ssu-Chr5 69956675 69959989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2569 53 400 Cytochrome P450 AT5G36110 44.444 2.00e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2569 - - gmx:100808690 892.878