Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2515 ATGGCACCAGAATATGCATTATGGGGTTACCTGTCTTACAAGGCTGATGTTTACAGTTATGGGGTTGTGGTCTTGGAAGTTGTTAGCGGGAAGAACAATAACAATTACATGCCAAGTGATGATTGTGTTTGCCTTCTAGACAAGGCATGTCATCTGCAGCGTACAGAAAACTTAATAGAACTGGTTGATGAAAGGTTGGAATCAGAGGTAAACCCAACTGAAGCAATACATTTGATGAAAGTAGCTCTCCTGTGCACCGATGTATCGCCTTCTGTTAGGCCTGCAATGTCTGAGGTTGTAAACATGCTTGAAGGAAGAATGAGTATTCCGGATGCTATCCCACAACCAAGTGGTTTTAGAGAAGATTTAAGGTTTAAAGCCATGAGggacattcatcaacaaaaggAAAGTCACAGTTTGAGCACAAGCCGAACAGACAATTCAACAGGAGTCCTTACACTTAGCTCTCCCTAA 474 0.4051 MAPEYALWGYLSYKADVYSYGVVVLEVVSGKNNNNYMPSDDCVCLLDKACHLQRTENLIELVDERLESEVNPTEAIHLMKVALLCTDVSPSVRPAMSEVVNMLEGRMSIPDAIPQPSGFREDLRFKAMRDIHQQKESHSLSTSRTDNSTGVLTLSSP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2515 157 MobiDBLite consensus disorder prediction 140 157 - -
Ssu5g2515 157 MobiDBLite consensus disorder prediction 130 157 - -
Ssu5g2515 157 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Ssu5g2515 157 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Ssu5g2515 157 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 145 - -
Ssu5g2515 157 PANTHER RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED 1 145 - -
Ssu5g2515 157 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu5g2515 157 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2515 Ssu-Chr5 69094312 69094914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2515 1 143 Receptor kinase-like Gene Family AT1G07650 49.306 1.59e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu5g2515 PK_Tyr_Ser-Thr 1.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2515 - - vra:106779815 243.047