LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu5g2504	ATGGCTTCGGCGGCTATATTCTCGTCGCTACGGCGGCGCCGGTCGCCGTCTCTGGAGGCGTTTCTGGCGCCGGTCGACCTCTCCGACGTGGCACTGCTGGAGACGCTCATCTCCGTCGCCGGCGACGTCGAGTCCTGCTTCTCCGGCTACCGGTTCCCCTTCCAGCGCCGGAACTCTAGGTCCCTCGTCGGAAAAGTGGAGATTTTCCGGTCAATGTTGGAGTGTTTGAGAGACTTCACCACCTCCGCCGGCGGCGGTCTCCCCCCCACGGCGGTGCTCTGCCTGAAGGAGCTTTATCTGCTGTTATATCGCTCCAAGATTCTCCTTGATTACTGTGCCCAATCGAGCAAGTTGTGGCTCTTGCTTCAGAACCATTCTGTTTCTGGTCACTTCCATGATTTGAGTCAAGAATTTTCGACCCTTTTGGATGTTTTTCCCGTTATGGAGGTTGGACTAAGTGATGATGTTAAGGAACAGATTGAGTTGTTGCAGAGACAGTCCAAAAGGGCCAAGTTGTTCATAGATAAGAAAGATGATGCCCTTAGGATAAGGTTCTTTTGGTATCTCGATGAGTTTGAGAGTGGGAGGGTTCCCGATTCTAAGGAATTGAGGTGTTTCTTTGTGGATAGGTTGCGGATTCTTGACTGGCAAGAGTTGTAG	660	0.5242	MASAAIFSSLRRRRSPSLEAFLAPVDLSDVALLETLISVAGDVESCFSGYRFPFQRRNSRSLVGKVEIFRSMLECLRDFTTSAGGGLPPTAVLCLKELYLLLYRSKILLDYCAQSSKLWLLLQNHSVSGHFHDLSQEFSTLLDVFPVMEVGLSDDVKEQIELLQRQSKRAKLFIDKKDDALRIRFFWYLDEFESGRVPDSKELRCFFVDRLRILDWQEL	219

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu5g2504	219	PANTHER	U BOX DOMAIN-CONTAINING	11	216	-	-
	Ssu5g2504	219	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 17	11	216	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu5g2504	Ssu-Chr5	68926469	68927128	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu5g2504	1	215	U-box Gene Family	AT1G29340	63.436	7.35e-73	233

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu5g2504	-		-	gmx:100797462	362.073