Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2498 ATGGGAAGCCAAAATGTGAAGCTGCTAAGCTTTCTGTTGAGTCCAATTGGTCACAGAGTTGAATGGGCCCTAAAGCTCAAGGGTGTTGATTACGAGTATATAGAAGAAGATATCTTCAACAAAAGCAACCTCCTTCTGAAACTGAACCCGGTTCACAAAAAGGTTCCGGTTCTTGTTCACAACCAGAAACCAATCGCTGAGTCACTTATCATCCTTGAATACATCGACCAAACATGGAAGCAATATCCACTGTTGTCTCAACATCCTTATCAAAGAGCCCTTGCTCGGTTTTGGGGTACTGTAGCTGATAAGATTGCGAAGACATCATGGGTTGCAATGTGTTGCAGCGGGGATGAACAGGAAAATAATGTGAAGGAAGCCAGAGAAGTGATGGATAAGATAGAAGAAGAGATTAAGGGGAAGAAATTCTTTGGCGGGGACAATATTGGGTACCTTGATCTTGCATTTGGATGGATCCCTTATTGGCTTCCTGTTTGGGAGGAGGTTGGGTCAATGCAAATAGTTGACCCATTGAGACATTCTGCCATCTCTGCATGGATCACCAATTTTCTCACCCACCCTGTCATCAAGGACAGCTTGCCCCCAAGAGACAAGATGCTTGTTTATTCCCACCGTCGCAAAGCAGAGTTTTCTTCAACTCCTCGTGGTTGA 672 0.4449 MGSQNVKLLSFLLSPIGHRVEWALKLKGVDYEYIEEDIFNKSNLLLKLNPVHKKVPVLVHNQKPIAESLIILEYIDQTWKQYPLLSQHPYQRALARFWGTVADKIAKTSWVAMCCSGDEQENNVKEAREVMDKIEEEIKGKKFFGGDNIGYLDLAFGWIPYWLPVWEEVGSMQIVDPLRHSAISAWITNFLTHPVIKDSLPPRDKMLVYSHRRKAEFSSTPRG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2498 223 PANTHER GLUTATHIONE S-TRANSFERASE 4 217 - -
Ssu5g2498 223 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Ssu5g2498 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Ssu5g2498 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Ssu5g2498 223 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Ssu5g2498 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 217 IPR045073 -
Ssu5g2498 223 Gene3D - 85 221 - -
Ssu5g2498 223 CDD GST_N_Tau 6 79 - -
Ssu5g2498 223 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Ssu5g2498 223 Gene3D Glutaredoxin 1 84 - -
Ssu5g2498 223 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Ssu5g2498 223 SFLD Main (cytGST) 2 219 - -
Ssu5g2498 223 Coils Coil 117 137 - -
Ssu5g2498 223 SUPERFAMILY GST C-terminal domain-like 77 213 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2498 Ssu-Chr5 68763115 68766069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2498 2 213 Glutathione S-transferase Gene Family AT2G29420 45.070 1.99e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2498 K00799 - gmx:100791741 402.519