Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2466 ATGGCCTCCACCAAGGAACGCGAAACCTTCGTTTACATCGCCAAGCTCGCCGAACAAGCCGAACGCTACGAAGAAATGGTGGACGCAATGAAGAACGTGGCAAAGCTAAACGTGGAATTGACGGTTGAGGAGCGGAACCTTCTGTCGGTTGGGTACAAGAACGTGGTGGGTGCTCGTAGGGCTTCGTGGAGGATTCTTTCGTCGATTGAGCAGAAGGAAGAGGCCAAAGGGAACGATGTGAGTGTGAAGCGGATAAAGGAGTATAGGCAGAAGGTGGAGTCTGAGTTGTCCAATATCTGCGACGATATCATGAATGTCATTGATGAACACCTTATTCCTTCTAGCTCTGCTGGTGAACCTAGtgtttttttctacaaaatGAAGGGGGACTATTACCGGTATCTCGCGGAGTTCAAGTCTGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGATGGCTTCCACCACTGCAGAGACTGAGTTACCTCCCACGCATCCCATCCGATTGGGTCTGGCTTTGAACTTCTCTgtcttttattatgaaattttgaacTCTCCTGAAAGGGCCTGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGCTGAGGAACAAAAGGTGGATTCTGCCCGAGCTGCTGGAGGTGAAGATGCATAG 780 0.4731 MASTKERETFVYIAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRQKVESELSNICDDIMNVIDEHLIPSSSAGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQMASTTAETELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKVDSARAAGGEDA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2466 259 Coils Coil 13 33 - -
Ssu5g2466 259 Gene3D - 1 250 IPR036815 -
Ssu5g2466 259 PANTHER 14-3-3 PROTEIN 4 252 IPR000308 -
Ssu5g2466 259 MobiDBLite consensus disorder prediction 238 259 - -
Ssu5g2466 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Ssu5g2466 259 Pfam 14-3-3 protein 14 235 IPR023410 -
Ssu5g2466 259 SMART 1433_4 7 248 IPR023410 -
Ssu5g2466 259 MobiDBLite consensus disorder prediction 240 259 - -
Ssu5g2466 259 PIRSF 14-3-3 1 247 IPR000308 -
Ssu5g2466 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Ssu5g2466 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Ssu5g2466 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Ssu5g2466 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Ssu5g2466 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Ssu5g2466 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Ssu5g2466 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Ssu5g2466 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Ssu5g2466 259 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 4 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2466 Ssu-Chr5 68078509 68084077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2466 1 259 14-3-3 family AT2G42590 79.389 1.72e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2466 K06630 - gmx:100807980 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2466 5 68078509 68084077 Ssu5g2466 5 68078509 68084077 ECH